Pairwise Alignments

Query, 379 a.a., carbamoyl-phosphate synthase small subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 364 a.a., carbamoyl-phosphate synthase, small subunit from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  307 bits (787), Expect = 3e-88
 Identities = 176/376 (46%), Positives = 220/376 (58%), Gaps = 22/376 (5%)

Query: 3   KSALLVLEDGTVFRGVSIGADGISVGEVVFNTSMTGYQEILTDPSYSQQIVTLTYPHIGN 62
           + A L+LEDGTVF G  IG  G + GE+ FNT MTGYQEI TDPSY+ QIV  T  HIGN
Sbjct: 4   QKATLLLEDGTVFYGTLIGKHGTNGGEICFNTGMTGYQEIYTDPSYTGQIVVTTTSHIGN 63

Query: 63  TGTNSEDEESTAIHAQGLVIRDLPLIASNFRSEQSLSDYLKSQNIVGIADIDTRKLTRIL 122
            G    + ES       +V+     I S   + QSL ++L+S  I GIAD+DTRKL R +
Sbjct: 64  YGVIDSEAESDGPTIASIVVNSFSEIYSRLDATQSLQEFLESNGITGIADVDTRKLVRHI 123

Query: 123 REKGAQNGCIMAG-DNLDEALALAKAKEFPGLKGMDLAKVVSTKEAYAWKQGSWTLEGGL 181
           R KGA N  I +  DNL++     +  + P + G++L+  V TKE Y     + T++   
Sbjct: 124 RSKGAMNAIISSEFDNLEDLQK--ELDKVPDMAGLELSSKVCTKEPYYVGDENSTIK--- 178

Query: 182 PEAKADSELPYHVVAYDFGAKRNILRMLVDRGCRLTVVPAQTSAEDVLALNPDGVFLSNG 241
                       V   D+G KRNILR L  RG    V PA+T+  D+ A  P+  FLSNG
Sbjct: 179 ------------VACVDYGIKRNILRNLAARGVYCKVFPAKTAVADMEAWQPNAYFLSNG 226

Query: 242 PGDPEPCTYAIEATRVFLEKNIPVFGICLGHQILALASGAKTVKMKFGHHGANHPVKDLD 301
           PGDP    YA+E  +  L  N PVFGICLGHQ+LA A G KT KM  GH G NHP+K+L+
Sbjct: 227 PGDPAVMDYAVETVKEILALNKPVFGICLGHQLLAEAVGIKTYKMHHGHRGINHPIKNLN 286

Query: 302 RGVVMITSQNHGF---AADEATLPDNLRATHKSLFDGSLQGIHRTDKPAFSFQGHPEASP 358
            G   ITSQNHGF     D    PD +  TH  L D ++ GI   D+PAFS Q HPE++P
Sbjct: 287 TGKSEITSQNHGFNIVREDSENHPD-IEITHVHLNDNTVAGIKLKDRPAFSVQYHPESAP 345

Query: 359 GPHDAAPLFDHFIELI 374
           GPHD+  LFD FI LI
Sbjct: 346 GPHDSRYLFDDFISLI 361