Pairwise Alignments

Query, 379 a.a., carbamoyl-phosphate synthase small subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 401 a.a., carbamoylphosphate synthase small chain from Agrobacterium fabrum C58

 Score =  361 bits (927), Expect = e-104
 Identities = 191/380 (50%), Positives = 242/380 (63%), Gaps = 8/380 (2%)

Query: 4   SALLVLEDGTVFRGVSIGADGISVGEVVFNTSMTGYQEILTDPSYSQQIVTLTYPHIGNT 63
           +A+LVL DGTV  G  IGA G    EV FNT++TGY+EILTDPSY  QIVT T+PHIGN 
Sbjct: 13  TAMLVLADGTVIEGTGIGATGKVQAEVCFNTALTGYEEILTDPSYLGQIVTFTFPHIGNV 72

Query: 64  GTNSEDEESTAIHAQ----GLVIRDLPLIASNFRSEQSLSDYLKSQNIVGIADIDTRKLT 119
           GTN ED E     A+    G++ +      SNFR+ + L  +LK++ ++G+  IDTR LT
Sbjct: 73  GTNEEDIEDLTPAARRGAVGVIFKADITDPSNFRAVKHLDAWLKARGVIGLCGIDTRALT 132

Query: 120 RILREKGAQNGCIMAGDN--LDEALALAKAKEFPGLKGMDLAKVVSTKEAYAWKQGSWTL 177
             +RE GA N  I    N   D     A+AK + GL G+DLA   ++ ++  W +  W  
Sbjct: 133 AWIRENGAPNAVIAHDPNGVFDIEALKAEAKAWSGLVGLDLAIEATSGQSSTWTETPWVW 192

Query: 178 EGGLPEAKADSELPYHVVAYDFGAKRNILRMLVDRGCRLTVVPAQTSAEDVLALNPDGVF 237
             G      +++  YHVV  DFG KRNILR+     C++TVVPAQTSAED+LAL PDGVF
Sbjct: 193 NKGYGTL-GEADAKYHVVCVDFGVKRNILRLFAGLDCKVTVVPAQTSAEDILALKPDGVF 251

Query: 238 LSNGPGDPEPC-TYAIEATRVFLEKNIPVFGICLGHQILALASGAKTVKMKFGHHGANHP 296
           LSNGPGDP     YA+   +  ++  +P+FGICLGHQ+L LA GAKT KM  GHHGANHP
Sbjct: 252 LSNGPGDPAATGEYAVPVIQNLIKSELPIFGICLGHQMLGLAVGAKTEKMHQGHHGANHP 311

Query: 297 VKDLDRGVVMITSQNHGFAADEATLPDNLRATHKSLFDGSLQGIHRTDKPAFSFQGHPEA 356
           VKD   G V I S NHGFA D  +LP+ +  TH SLFDG+  G+    KP FS Q HPEA
Sbjct: 312 VKDFTTGKVEIVSMNHGFAVDTKSLPEGVEETHTSLFDGTNCGLRIVGKPVFSVQHHPEA 371

Query: 357 SPGPHDAAPLFDHFIELIKQ 376
           SPGP D+  LF  F+ L+++
Sbjct: 372 SPGPQDSHYLFRRFVNLLRE 391