Pairwise Alignments

Query, 1076 a.a., carbamoyl-phosphate synthase large chain from Vibrio cholerae E7946 ATCC 55056

Subject, 1148 a.a., Carbamoyl-phosphate synthase large chain from Xanthobacter sp. DMC5

 Score = 1288 bits (3332), Expect = 0.0
 Identities = 667/1100 (60%), Positives = 818/1100 (74%), Gaps = 40/1100 (3%)

Query: 1    MPKRTDIQSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEM 60
            MPKRTDI++ILI+GAGPIVIGQACEFDYSG QA KAL+EEGYRV+LVNSNPATIMTDP+M
Sbjct: 25   MPKRTDIETILIIGAGPIVIGQACEFDYSGTQAVKALKEEGYRVVLVNSNPATIMTDPDM 84

Query: 61   ADATYIEPIHWEVVRKIIEKERPD-----AILPTMGGQTALNCALALEKHGVLAEFGVEM 115
            ADATYIEPI  E+V KIIEKER D     A+LPTMGGQTALNCAL+L+K G L ++ VEM
Sbjct: 85   ADATYIEPITAEIVTKIIEKERGDRSKGFALLPTMGGQTALNCALSLKKMGTLEKYDVEM 144

Query: 116  IGATADAIDKAEDRSRFDKAMKSIGLECPRADTAKSMEEAYKVLDMVGFPCIIRPSFTMG 175
            IGATA+AIDKAEDR  F +AM  IGL  P++   K++ +A + LD VG P IIRPSFTMG
Sbjct: 145  IGATAEAIDKAEDRELFREAMTKIGLSTPKSRQIKTLPQALEALDEVGLPAIIRPSFTMG 204

Query: 176  GSGGGIAYNREEFEEICTRGLDLSPTNELLIDESLIGWKEYEMEVVRDKNDNCIIVCAIE 235
            G+GGGIAYN+ EF EI  RG+D SPTNE+L++ES++GWKEYEMEVVRDK DNCII+C+IE
Sbjct: 205  GTGGGIAYNKAEFIEIIERGIDASPTNEVLVEESVLGWKEYEMEVVRDKADNCIIICSIE 264

Query: 236  NFDPMGIHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFGINPKDGRM 295
            N DPMG+HTGDSITVAPA TLTDKEYQIMR+ASLAVLREIGVETGGSNVQF +NP+DGR+
Sbjct: 265  NIDPMGVHTGDSITVAPALTLTDKEYQIMRDASLAVLREIGVETGGSNVQFAVNPEDGRL 324

Query: 296  VIIEMNPRVSRSSALASKATGFPIAKVAAKLAVGFTLDELMNDITGGATPASFEPTIDYV 355
            ++IEMNPRVSRSSALASKATGFPIAKVAA+LAVG+TLDE+ NDITGGATPASFEPTIDYV
Sbjct: 325  IVIEMNPRVSRSSALASKATGFPIAKVAARLAVGYTLDEIENDITGGATPASFEPTIDYV 384

Query: 356  VTKIPRFNFEKFAGANDRLTTQMKSVGEVMAIGRNQQESLQKALRGLEVGAAGLD--EKV 413
            VTKIPRF FEKF GA+  LTT MKSVGE MAIGR  QESLQKALR LE G +GLD  E  
Sbjct: 385  VTKIPRFAFEKFPGADPVLTTAMKSVGEAMAIGRTFQESLQKALRSLETGLSGLDDIEIE 444

Query: 414  DLDAPDALTKIRYELKEAGAERIWYIADAFRAGMSVDGVFNLTNIDRWFLVQIEELVKLE 473
             L   D    +R  L     +R+ Y+A A R G+S + + +   ID WFL +I  +V++E
Sbjct: 445  GLGQGDDKNAVRAALGTPTPDRLLYVAQAMRLGLSDEQIHSACKIDPWFLAEIRGIVEME 504

Query: 474  AEVKAGGFAGLNQDVLRKMKRKGFSDARLSKLLGVSENEIRRLRDQYNIHPVYKRVDTCA 533
             +V+  G         R++K  GFSDARL+ L G+ E E+R  R   ++ PVYKR+DTCA
Sbjct: 505  QKVRRLGLPE-TAGQFRRLKAMGFSDARLATLAGLHEGEVRARRQALDVRPVYKRIDTCA 563

Query: 534  AEFKSDTAYMYSTYDEEC------EANPTDKDKIMVLGGGPNRIGQGIEFDYCCVHAALA 587
            AEF S TAYMYSTY+         EA P++++K+++LGGGPNRIGQGIEFDYCC HAA A
Sbjct: 564  AEFASPTAYMYSTYETPFAGVLADEAQPSEREKVIILGGGPNRIGQGIEFDYCCCHAAFA 623

Query: 588  LREDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLAIVRVEKP----KGVIVQYGG 643
            L++ GYE IMVNCNPETVSTDYDTSDRLYFEP+T EDVL ++  EK     KGVIVQ+GG
Sbjct: 624  LKDAGYEAIMVNCNPETVSTDYDTSDRLYFEPLTAEDVLELIAREKTRGTLKGVIVQFGG 683

Query: 644  QTPLKLARALEAAGVPVIGTSPDAIDRAEDRERFQQAVQRLGLKQPDNATVTAIEQAIEK 703
            QTPLKLA+ALE A VP++GTSPDAID AEDR+RF+  + RL ++QP N    ++EQA   
Sbjct: 684  QTPLKLAKALEDADVPILGTSPDAIDLAEDRDRFKTLLDRLKIRQPANGISYSVEQARLV 743

Query: 704  SREIGFPLVVRPSYVLGGRAMEIVYDEQDLRRYFNEAV---------------------S 742
            + E+G+P+VVRPSYVLGGRAM+I+ +E  L  Y  E +                     +
Sbjct: 744  AAELGYPMVVRPSYVLGGRAMQIIREESQLGDYLLETLPGLVPQEIKARYPNDKTGQINT 803

Query: 743  VSNESPVLLDRFLDDATEVDVDAICDGERVVIGGIMEHIEQAGVHSGDSACSLPAYTLSQ 802
            V  ++P+L DR+L DA EVDVDA+CDG+ V I GIMEHIE+AG+HSGDSAC+LP Y+LS 
Sbjct: 804  VLGKNPLLFDRYLSDAIEVDVDALCDGKDVFIAGIMEHIEEAGIHSGDSACTLPPYSLSP 863

Query: 803  EIQDKMREQVEKLAFELGVRGLMNIQFAVKDNEVYLIEVNPRAARTVPFVSKATGAPLAK 862
            +    + +Q   +A  LGV GLMN+Q+A+K +E+Y++EVNPRA+RTVPFV+K  G P+AK
Sbjct: 864  DTLAALEKQTAAMALALGVGGLMNVQYAIKGDEIYVLEVNPRASRTVPFVAKVIGLPIAK 923

Query: 863  IAARVMVGQTLEQQGFTKEIIPPYYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGAT 922
            IAARVM G+ L      +  +  + +VKE V PF +FPGVD +LGPEMRSTGEVMG+   
Sbjct: 924  IAARVMAGEKLASFNLVQPKL-GHIAVKEAVFPFARFPGVDTVLGPEMRSTGEVMGLDTD 982

Query: 923  FAEAYAKAELGCGSVYPEGGRALLSVREGDKQRVVDLASKLVKLGYQLDATHGTAVILGE 982
            F  A+AK++LG G+  P+ G   +S+++GDK R++     LV LG+++ AT GT   L E
Sbjct: 983  FGVAFAKSQLGGGTKVPKSGTVFVSLKDGDKIRILPTMKMLVDLGFKIIATSGTQRFLEE 1042

Query: 983  AGINPRLVNKVHEGRPHILDRIKNHEYTYIVNTASGRQAIEDSKVLRRGALAHKVNYTTT 1042
             G+    +NKV EGRPHI+D IKN     + NT  G QA+ DS+ LRR AL  KV Y TT
Sbjct: 1043 HGVPATKINKVLEGRPHIVDAIKNGGVQLVFNTTEGAQALADSRSLRRAALLQKVPYYTT 1102

Query: 1043 LNAAFATCMSHTADAKASVT 1062
            L+ A A      A     +T
Sbjct: 1103 LSGAIAAAQGIKAYVGGDLT 1122