Pairwise Alignments

Query, 1076 a.a., carbamoyl-phosphate synthase large chain from Vibrio cholerae E7946 ATCC 55056

Subject, 1082 a.a., Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) from Variovorax sp. SCN45

 Score = 1439 bits (3726), Expect = 0.0
 Identities = 738/1084 (68%), Positives = 863/1084 (79%), Gaps = 18/1084 (1%)

Query: 1    MPKRTDIQSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEM 60
            MPKRTD++SILI+GAGPI+IGQACEFDYSG QACKALREEGY+VIL+NSNPATIMTDP  
Sbjct: 1    MPKRTDLKSILIIGAGPIIIGQACEFDYSGVQACKALREEGYKVILINSNPATIMTDPAT 60

Query: 61   ADATYIEPIHWEVVRKIIEKERPDAILPTMGGQTALNCALALEKHGVLAEFG-------V 113
            AD TYIEPI W+ V KII KERPDAILPTMGGQTALNCAL L ++GVL ++        V
Sbjct: 61   ADVTYIEPITWQTVEKIIAKERPDAILPTMGGQTALNCALDLWRNGVLDKYTGAATNKPV 120

Query: 114  EMIGATADAIDKAEDRSRFDKAMKSIGLECPRADTAKSMEEAYKVLDMVGFPCIIRPSFT 173
            E+IGAT +AIDKAEDR +F  AM  IGL   R+  A SM+EA+ V   VGFP +IRPSFT
Sbjct: 121  ELIGATPEAIDKAEDRLKFKDAMTKIGLGSARSGIAHSMDEAWAVQKSVGFPTVIRPSFT 180

Query: 174  MGGSGGGIAYNREEFEEICTRGLDLSPTNELLIDESLIGWKEYEMEVVRDKNDNCIIVCA 233
            +GG+GGGIAYN EEFE IC RG++ SPTNELLI+ESL+GWKEYEMEVVRDK DNCIIVC+
Sbjct: 181  LGGTGGGIAYNPEEFETICKRGIEASPTNELLIEESLLGWKEYEMEVVRDKADNCIIVCS 240

Query: 234  IENFDPMGIHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFGINPKDG 293
            IEN DPMG+HTGDSITVAPAQTL+DKEYQI+RNASLAVLREIGV+TGGSNVQF INPKDG
Sbjct: 241  IENLDPMGVHTGDSITVAPAQTLSDKEYQILRNASLAVLREIGVDTGGSNVQFSINPKDG 300

Query: 294  RMVIIEMNPRVSRSSALASKATGFPIAKVAAKLAVGFTLDELMNDITGGATPASFEPTID 353
            RMV+IEMNPRVSRSSALASKATGFPIAKVAAKLAVG+TLDEL N+ITGGATPASFEP+ID
Sbjct: 301  RMVVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELRNEITGGATPASFEPSID 360

Query: 354  YVVTKIPRFNFEKFAGANDRLTTQMKSVGEVMAIGRNQQESLQKALRGLEVGAAGLDEKV 413
            YVVTKIPRF FEKF  A+ RLTTQMKSVGEVMA+GR  QES QKALRGLEVG  GL+EK 
Sbjct: 361  YVVTKIPRFAFEKFPQADSRLTTQMKSVGEVMAMGRTFQESFQKALRGLEVGVDGLNEKT 420

Query: 414  DLDAPDALTKIRYELKEAGAERIWYIADAFRAGMSVDGVFNLTNIDRWFLVQIEELVKLE 473
                 + L K   EL E G ERIWY+ DAF  G+SVD VF LT ID WFLVQIEE+VK+E
Sbjct: 421  Q--DREVLEK---ELGEPGPERIWYVGDAFAMGLSVDEVFALTKIDPWFLVQIEEIVKIE 475

Query: 474  AEVKAGGFAGLNQDVLRKMKRKGFSDARLSKLLGVSENEIRRLRDQYNIHPVYKRVDTCA 533
             E++      +++D L  +K+KGFSD RL++ L  ++  IR  R    + PVYKRVDTCA
Sbjct: 476  LELETKSLDDIDRDTLLALKKKGFSDRRLARQLKTTDTAIREKRRALGVRPVYKRVDTCA 535

Query: 534  AEFKSDTAYMYSTYDEECEANPTDKDKIMVLGGGPNRIGQGIEFDYCCVHAALALREDGY 593
            AEF ++TAYMYSTY++ECEA+PTDK KIMVLGGGPNRIGQGIEFDYCCVHAALA+REDGY
Sbjct: 536  AEFATNTAYMYSTYEDECEADPTDKKKIMVLGGGPNRIGQGIEFDYCCVHAALAMREDGY 595

Query: 594  ETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLAIVRVEKPKGVIVQYGGQTPLKLARAL 653
            ETIMVNCNPETVSTDYDTSDRLYFEP+TLEDVL IV  EKP GVIVQYGGQTPLKLA  L
Sbjct: 596  ETIMVNCNPETVSTDYDTSDRLYFEPLTLEDVLEIVDKEKPLGVIVQYGGQTPLKLALDL 655

Query: 654  EAAGVPVIGTSPDAIDRAEDRERFQQAVQRLGLKQPDNATVTAIEQAIEKSREIGFPLVV 713
            EA GVP+IGTSPD ID AEDRERFQ+ +  L L QP NAT     +A+EK+  +G+PLVV
Sbjct: 656  EANGVPIIGTSPDMIDAAEDRERFQKLLHELKLLQPPNATARTEAEALEKAAALGYPLVV 715

Query: 714  RPSYVLGGRAMEIVYDEQDLRRYFNEAVSVSNESPVLLDRFLDDATEVDVDAICDGE-RV 772
            RPSYVLGGRAMEIV++++DL RY  EAV VSN+SPVLLDRFL+DA E DVD + D E + 
Sbjct: 716  RPSYVLGGRAMEIVHEQRDLERYMREAVKVSNDSPVLLDRFLNDAVECDVDCLRDAEGQT 775

Query: 773  VIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDKMREQVEKLAFELGVRGLMNIQFAVK 832
            +IGG+MEHIEQAGVHSGDSACSLP Y+LS +   +++ Q   +A  L V GLMN+QFA++
Sbjct: 776  LIGGVMEHIEQAGVHSGDSACSLPPYSLSADTVAELKRQSAAMAAALNVVGLMNVQFAIQ 835

Query: 833  DNE----VYLIEVNPRAARTVPFVSKATGAPLAKIAARVMVGQTLEQQGFTKEIIPPYYS 888
              +    +Y++EVNPRA+RTVP+VSKATG  LAK+AAR M GQ+L+ QG TKE+ PPY+S
Sbjct: 836  QKDGKDVIYVLEVNPRASRTVPYVSKATGIQLAKVAARCMAGQSLKSQGVTKEVTPPYFS 895

Query: 889  VKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGATFAEAYAKAELGCGSVYPEGGRALLSV 948
            VKE V PF KFPGVD +LGPEM+STGEVMGVG TF EA+ K++LG G+  P+ G+  +SV
Sbjct: 896  VKEAVFPFVKFPGVDTILGPEMKSTGEVMGVGKTFGEAFVKSQLGAGTHLPKSGKVFISV 955

Query: 949  REGDKQRVVDLASKLVKLGYQLDATHGTAVILGEAGINPRLVNKVHEGRPHILDRIKNHE 1008
            +  DK R V++A  LVKLG+ L AT GTA  +  AGI    VNKV EGRPHI+D IKN+E
Sbjct: 956  KNNDKARAVEVARGLVKLGFVLTATKGTAAAINAAGIECATVNKVTEGRPHIVDMIKNNE 1015

Query: 1009 YTYIVNTASGRQ-AIEDSKVLRRGALAHKVNYTTTLNAAFATCMSHTADAKASVTSVQEL 1067
               ++NT   R+ AI DS+ +R  AL  +V   TT+  A A         +  V SVQE+
Sbjct: 1016 IALVINTVEERRNAITDSRQIRTSALLARVTTFTTIFGAEAAVEGMGFMDELGVISVQEM 1075

Query: 1068 HARV 1071
            HA++
Sbjct: 1076 HAQL 1079