Pairwise Alignments

Query, 1076 a.a., carbamoyl-phosphate synthase large chain from Vibrio cholerae E7946 ATCC 55056

Subject, 1085 a.a., carbamoyl-phosphate synthase large subunit from Magnetospirillum magneticum AMB-1

 Score = 1306 bits (3379), Expect = 0.0
 Identities = 668/1062 (62%), Positives = 821/1062 (77%), Gaps = 17/1062 (1%)

Query: 1    MPKRTDIQSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEM 60
            MPKRTDI+SILI+GAGPIVIGQACEFDYSG QACKAL++EGYRVILVNSNPATIMTDP +
Sbjct: 1    MPKRTDIKSILIIGAGPIVIGQACEFDYSGVQACKALKDEGYRVILVNSNPATIMTDPGL 60

Query: 61   ADATYIEPIHWEVVRKIIEKERPDAILPTMGGQTALNCALALEKHGVLAEFGVEMIGATA 120
            ADATYIEPI  E+V KIIEKERPDA+LPTMGGQTALN A+ L   G+L +FGVEMI A  
Sbjct: 61   ADATYIEPITPEIVAKIIEKERPDALLPTMGGQTALNTAMKLADMGILEKFGVEMIAAKR 120

Query: 121  DAIDKAEDRSRFDKAMKSIGLECPRADTAKSMEEAYKVLDMVGFPCIIRPSFTMGGSGGG 180
            D I KAEDR  F  AM  IGLE P++   K+++EA + LD VG P IIRPSFT+ G+GGG
Sbjct: 121  DVIAKAEDRLLFRDAMDKIGLESPKSRMVKTLQEAREALDFVGLPAIIRPSFTLAGTGGG 180

Query: 181  IAYNREEFEEICTRGLDLSPTNELLIDESLIGWKEYEMEVVRDKNDNCIIVCAIENFDPM 240
            IAYN  E+E I + GL  SP +E+L++ES++GWKEYEMEVVRDK DNCII+C+IEN DPM
Sbjct: 181  IAYNVAEYEHIVSGGLAASPVHEVLVEESVLGWKEYEMEVVRDKKDNCIIICSIENVDPM 240

Query: 241  GIHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFGINPKDGRMVIIEM 300
            G+HTGDSITVAPA TLTDKEYQIMRNASLAVLREIGV+TGGSNVQF +NPKDGRM +IEM
Sbjct: 241  GVHTGDSITVAPALTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFAVNPKDGRMTVIEM 300

Query: 301  NPRVSRSSALASKATGFPIAKVAAKLAVGFTLDELMNDITGGATPASFEPTIDYVVTKIP 360
            NPRVSRSSALASKATGFPIAKVAAKLAVG+TLDEL NDIT G TPASFEPTIDYVVTKIP
Sbjct: 301  NPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELTNDIT-GCTPASFEPTIDYVVTKIP 359

Query: 361  RFNFEKFAGANDRLTTQMKSVGEVMAIGRNQQESLQKALRGLEVGAAGLDEKVDL---DA 417
            RF FEKF GA+  LTT MKSVGE MAIGR  QESLQK LR +E G  GLDE V++    A
Sbjct: 360  RFTFEKFPGADPNLTTSMKSVGEAMAIGRTFQESLQKGLRSMETGLTGLDE-VEIPGAGA 418

Query: 418  PDALTKIRYELKEAGAERIWYIADAFRAGMSVDGVFNLTNIDRWFLVQIEELVKLEAEVK 477
             D    ++  L +   +R+  IA AFR G+++D V      D+WFL Q++ +V  EAE++
Sbjct: 419  GDMKDAVKSALAQPRHDRLLVIAQAFRFGLTIDEVHAACFYDKWFLAQLKGIVDAEAEIR 478

Query: 478  AGGFAGLNQDVLRKMKRKGFSDARLSKLLGVSENEIRRLRDQYNIHPVYKRVDTCAAEFK 537
            A G   ++   L ++K+ GFSD RL+KL G S  E    R+  N+ PV+KR+DTCAAEF 
Sbjct: 479  AKGLP-IDAPGLLRLKKMGFSDQRLAKLSGKSLVETAFRREVLNVKPVFKRIDTCAAEFP 537

Query: 538  SDTAYMYSTYD------EECEANPTDKDKIMVLGGGPNRIGQGIEFDYCCVHAALALRED 591
            S TAYMYS Y+       ECE++P+D+DK+++LGGGPNRIGQGIEFDYCCVHAA AL E 
Sbjct: 538  SSTAYMYSCYEGDGVNPPECESDPSDRDKVIILGGGPNRIGQGIEFDYCCVHAAYALDEA 597

Query: 592  GYETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLAIVRVE----KPKGVIVQYGGQTPL 647
            G ETIMVNCNPETVSTDYDTSDRLYFEP+T E V+ +VR E    K  G IVQ+GGQTPL
Sbjct: 598  GKETIMVNCNPETVSTDYDTSDRLYFEPLTAETVIDLVRKEQSNGKVLGCIVQFGGQTPL 657

Query: 648  KLARALEAAGVPVIGTSPDAIDRAEDRERFQQAVQRLGLKQPDNATVTAIEQAIEKSREI 707
            KLA ALE AG+P++GTSPD+ID AEDRERFQ+ + +LGLKQP N T  ++E+AI+ + +I
Sbjct: 658  KLAHALEQAGIPILGTSPDSIDLAEDRERFQKMLHQLGLKQPANGTARSLEEAIKVAEKI 717

Query: 708  GFPLVVRPSYVLGGRAMEIVYDEQDLRRYFNEAVSVSNESPVLLDRFLDDATEVDVDAIC 767
            G+P+V+RPS+VLGGRAM+IVYD + L RY  EAV VS + PVL+D +L DA EVDVDA+C
Sbjct: 718  GYPVVIRPSFVLGGRAMQIVYDHEALERYMVEAVKVSGDDPVLIDYYLKDAIEVDVDALC 777

Query: 768  DGERVVIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDKMREQVEKLAFELGVRGLMNI 827
            DG +V + GIM+HIE+AG+HSGDSACSLP Y+L +    ++  Q   +A  L V GLMN 
Sbjct: 778  DGNQVYVAGIMQHIEEAGIHSGDSACSLPPYSLDKATIAELERQTAAMAKALNVVGLMNC 837

Query: 828  QFAVKDNEVYLIEVNPRAARTVPFVSKATGAPLAKIAARVMVGQTLEQQGFTKEIIPPYY 887
            Q+A+KD ++Y++EVNPRA+RTVPFV+KATG P+AKIAARVM G+TL   G +      + 
Sbjct: 838  QYAIKDGDIYILEVNPRASRTVPFVAKATGVPIAKIAARVMAGETLASFGLSTRPELKHV 897

Query: 888  SVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGATFAEAYAKAELGCGSVYPEGGRALLS 947
            +VKE V PF +FPGVD LLGPEM+STGEVMG+ + FA A+AK++LG G+  P  G A +S
Sbjct: 898  AVKEAVFPFARFPGVDILLGPEMKSTGEVMGIDSDFARAFAKSQLGAGTNLPTEGGAFIS 957

Query: 948  VREGDKQRVVDLASKLVKLGYQLDATHGTAVILGEAGI-NPRLVNKVHEGRPHILDRIKN 1006
            VR+GDK  +V++A +L+++G+++ AT GTA  L + G+    +VNKV EGRPH +D + N
Sbjct: 958  VRDGDKPAMVEIARRLLEMGFKVMATDGTAFYLKDRGVTGVTIVNKVLEGRPHCVDAMMN 1017

Query: 1007 HEYTYIVNTASGRQAIEDSKVLRRGALAHKVNYTTTLNAAFA 1048
             +   +VNT  G QA++DS  +RR AL + + + TT+  A A
Sbjct: 1018 GQVQLVVNTTEGSQAVKDSFSIRRTALTNNIPHYTTVAGARA 1059