Pairwise Alignments

Query, 1076 a.a., carbamoyl-phosphate synthase large chain from Vibrio cholerae E7946 ATCC 55056

Subject, 1162 a.a., carbamoylphosphate synthase large subunit from Agrobacterium fabrum C58

 Score = 1251 bits (3237), Expect = 0.0
 Identities = 670/1164 (57%), Positives = 821/1164 (70%), Gaps = 100/1164 (8%)

Query: 1    MPKRTDIQSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEM 60
            MPKR DI+SILI+GAGPIVIGQACEFDYSG QACKAL+EEGYRVILVNSNPATIMTDP +
Sbjct: 1    MPKRQDIKSILIIGAGPIVIGQACEFDYSGTQACKALKEEGYRVILVNSNPATIMTDPGL 60

Query: 61   ADATYIEPIHWEVVRKIIEKERPDAILPTMGGQTALNCALALEKHGVLAEFGVEMIGATA 120
            ADATY+EPI  EVV KII KERPDA+LPTMGGQTALN AL+L++ GVL  + VEMIGA  
Sbjct: 61   ADATYVEPITPEVVAKIIAKERPDALLPTMGGQTALNTALSLKRMGVLDRYNVEMIGAKP 120

Query: 121  DAIDKAEDRSRFDKAMKSIGLECPRADTAKS----------------------------- 151
            +AID AEDR+ F +AM  IGLE P++  A +                             
Sbjct: 121  EAIDMAEDRALFREAMARIGLETPKSMLANATEIKDADRKTHEAARTELKAKLSGAELDK 180

Query: 152  ------------------------MEEAYKVLDMVGFPCIIRPSFTMGGSGGGIAYNREE 187
                                    M  A + +D+VG P IIRPSFTMGG+GGGIAYNR E
Sbjct: 181  ALDNLENQWNLGETDRKQRYISHAMAIAAQAIDVVGLPAIIRPSFTMGGTGGGIAYNRSE 240

Query: 188  FEEICTRGLDLSPTNELLIDESLIGWKEYEMEVVRDKNDNCIIVCAIENFDPMGIHTGDS 247
            F EI   GLD SPT E+LI+ES++GWKEYEMEVVRDK DNCII+C+IEN DPMG+HTGDS
Sbjct: 241  FFEIIGGGLDASPTTEVLIEESVLGWKEYEMEVVRDKADNCIIICSIENIDPMGVHTGDS 300

Query: 248  ITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFGINPKDGRMVIIEMNPRVSRS 307
            ITVAPA TLTDKEYQ+MRNAS+AVLREIGVETGGSNVQF +NPKDGR+V+IEMNPRVSRS
Sbjct: 301  ITVAPALTLTDKEYQMMRNASIAVLREIGVETGGSNVQFAVNPKDGRLVVIEMNPRVSRS 360

Query: 308  SALASKATGFPIAKVAAKLAVGFTLDELMNDITGGATPASFEPTIDYVVTKIPRFNFEKF 367
            SALASKATGFPIAKVAAKLA+G+TLDEL NDITGGATPASFEP+IDYVVTKIPRF FEKF
Sbjct: 361  SALASKATGFPIAKVAAKLAIGYTLDELENDITGGATPASFEPSIDYVVTKIPRFAFEKF 420

Query: 368  AGANDRLTTQMKSVGEVMAIGRNQQESLQKALRGLEVGAAGLDEKVDL----DAPDALTK 423
             GA+  LTT MKSVGEVMAIGR   ESLQKALRG+E G  GLDE +++    +   +   
Sbjct: 421  PGASPILTTAMKSVGEVMAIGRTFAESLQKALRGMETGLTGLDE-IEIPGYEEGEGSKNA 479

Query: 424  IRYELKEAGAERIWYIADAFRAGMSVDGVFNLTNIDRWFLVQIEELVKLEAEVKAGGFAG 483
            IR  +     +R+  +A A R GMS + V   + ID WF+ Q++ +V +EA ++     G
Sbjct: 480  IRAAIGTPTPDRLRMVAQAMRMGMSEEEVHENSKIDPWFIAQLKAIVDMEARIRE---HG 536

Query: 484  LNQDV--LRKMKRKGFSDARLSKLLGVSENEIRRLRDQYNIHPVYKRVDTCAAEFKSDTA 541
            L QD   LR +K  GFSDARL+ L      E+  LR+  N+ PV+KR+DTCAAEF S TA
Sbjct: 537  LPQDAENLRMLKAMGFSDARLASLTSKRPKEVAELRNSLNVRPVFKRIDTCAAEFASPTA 596

Query: 542  YMYSTYD------EECEANPTDKDKIMVLGGGPNRIGQGIEFDYCCVHAALALREDGYET 595
            YMYSTY+         EA  +D+ K+++LGGGPNRIGQGIEFDYCC HAA AL++ G+E 
Sbjct: 597  YMYSTYETPFVGAARSEAQVSDRKKVVILGGGPNRIGQGIEFDYCCCHAAFALKDAGFEA 656

Query: 596  IMVNCNPETVSTDYDTSDRLYFEPVTLEDVLAIVRVEKPK----GVIVQYGGQTPLKLAR 651
            IM+NCNPETVSTDYDTSDRLYFEP+T EDV+ I+R E+ K    GVIVQ+GGQTPLKLA 
Sbjct: 657  IMINCNPETVSTDYDTSDRLYFEPLTAEDVIEIMRAEQEKGELVGVIVQFGGQTPLKLAE 716

Query: 652  ALEAAGVPVIGTSPDAIDRAEDRERFQQAVQRLGLKQPDNATVTAIEQAIEKSREIGFPL 711
            ALE  G+P++GT+PD ID AEDR+RFQ+ + +L L QP+N    ++EQA   + EIGFPL
Sbjct: 717  ALEKNGIPILGTAPDMIDLAEDRDRFQKLLMKLDLAQPNNGIAYSVEQARLVASEIGFPL 776

Query: 712  VVRPSYVLGGRAMEIVYDEQDLRRYFNEAV---------------------SVSNESPVL 750
            VVRPSYVLGGRAM+I++ E  L+ Y  + V                     ++  ++P+L
Sbjct: 777  VVRPSYVLGGRAMQIIHSEGQLQTYLLDTVPGLVPEDIKQRYPNDKTGQINTLLGKNPLL 836

Query: 751  LDRFLDDATEVDVDAICDGERVVIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDKMRE 810
             D +L +A EVDVDA+CDGE V + GIMEHIE+AG+HSGDSACSLP+ +LS+E  D++  
Sbjct: 837  FDSYLTNAVEVDVDALCDGENVFVSGIMEHIEEAGIHSGDSACSLPSRSLSKETLDELER 896

Query: 811  QVEKLAFELGVRGLMNIQFAVKDNEVYLIEVNPRAARTVPFVSKATGAPLAKIAARVMVG 870
            Q   LA  L V GLMN+Q+A+KD  +Y++EVNPRA+RTVPFV+K  GAP+AKIAARVM G
Sbjct: 897  QTTALAKALKVGGLMNVQYAIKDGTIYVLEVNPRASRTVPFVAKTIGAPIAKIAARVMAG 956

Query: 871  QTLEQ--QGFTKEIIP---PYYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGATFAE 925
            + L+     + ++  P    + +VKE V PF +FPGVD LLGPEMRSTGEV+G+   FA 
Sbjct: 957  EKLDAAIAAYGEKPDPRNLKHIAVKEAVFPFARFPGVDILLGPEMRSTGEVIGLDTDFAL 1016

Query: 926  AYAKAELGCGSVYPEGGRALLSVREGDKQRVVDLASKLVKLGYQLDATHGTAVILGEAGI 985
            A+AK++LG G   P  G   +SVR+ DK+ V+     LV+ G+++ AT GT   L E GI
Sbjct: 1017 AFAKSQLGAGVDLPRSGTVFVSVRDEDKEGVLSAIRILVESGFKVLATGGTQRFLAEQGI 1076

Query: 986  NPRLVNKVHEGRPHILDRIKNHEYTYIVNTASGRQAIEDSKVLRRGALAHKVNYTTTLNA 1045
            N   +NKV EGRPHI D I+N +   ++NT    +AI DSK LRR  L  KV Y TT+  
Sbjct: 1077 NAEKINKVQEGRPHIEDAIRNRQVQLVINTTDSNKAISDSKSLRRATLMQKVPYYTTMAG 1136

Query: 1046 AFATCMSHTADAKASVTSVQELHA 1069
            A A  ++  A  KA    V+ L +
Sbjct: 1137 AEAAALAIKA-LKAGNLEVKPLQS 1159