Pairwise Alignments

Query, 205 a.a., HNH endonuclease from Vibrio cholerae E7946 ATCC 55056

Subject, 214 a.a., hypothetical protein from Pseudomonas sp. DMC3

 Score = 45.8 bits (107), Expect = 6e-10
 Identities = 36/129 (27%), Positives = 51/129 (39%), Gaps = 12/129 (9%)

Query: 49  QGELCVYCEKKYSVDEMQVEHIKPKSGRNAQPNLCFTYSNYAVSCIQENRKTQT--CGQK 106
           QG LC YC ++       +EH +P+    A   L     N   SC++E R      CG +
Sbjct: 47  QGSLCCYCGREIEPATSHIEHFRPQEHFEA---LALDDENLFASCLRETRPGNPLHCGHR 103

Query: 107 KK---DNILFIEPTSPSCNSHFSLDTDGFINPRGFKNRKEKHSIQTTIDMLGLNKPHLQL 163
           K    +  L I P    C   F    +G I P       E       I++L L+  +L  
Sbjct: 104 KGNWFEEALHISPMDEQCELRFRYLQNGGIQPAD----TEDLPAAKMIEVLALDIAYLNN 159

Query: 164 ERKKQIERL 172
            R+  I RL
Sbjct: 160 RRRDTIRRL 168