Pairwise Alignments

Query, 540 a.a., recombinase RecF from Vibrio cholerae E7946 ATCC 55056

Subject, 479 a.a., AAA family ATPase from Dickeya dianthicola ME23

 Score =  211 bits (536), Expect = 6e-59
 Identities = 137/409 (33%), Positives = 222/409 (54%), Gaps = 47/409 (11%)

Query: 86  NTTIIIGNNGSGKSTILESISKCLQFLSDNIRIQNNNNYKFQDSEINIHSISGQTIVRCI 145
           N T+++GNNG+GK++IL++++  L +L   +R +  +     +  I     +GQT     
Sbjct: 30  NVTVLVGNNGAGKTSILQALATSLGWLVARVRSEKGSGSGISEDTIT----NGQTSAAIE 85

Query: 146 LEI-----------ENDFSFSCSLTKNRENISRKVSSELEEFKALARMYQRSNELDNNTL 194
           + +           +N   +  +L K R     + +S+L    ALA  Y+ +   D  + 
Sbjct: 86  IMVRDTTPSLSHAEDNKTEYHWTLAKTRSGKKGQHASQLNALSALADRYRTALTQDEQS- 144

Query: 195 SYPLLAYYPVERSVTLKRDDAVKYYERKKAKYSDKSEGLKNAFDGTSNFNDFFSWYKEID 254
           S PL+A+YPVERSV    D  +K   + + +  D   G  NA +   +F  FF W++E +
Sbjct: 145 SLPLIAFYPVERSVL---DIPLKIKGKHRFQQVD---GYDNALNQGVDFRRFFEWFRERE 198

Query: 255 DIINEFKAN-----DSITKEEIEYLLSKT---------DNKEKIGSLISQLLEKKNNYNN 300
           DI NE   +      +I     E   ++T         D K++I  L + L E K +  +
Sbjct: 199 DIENEATPSLADVLSNILDNNPEQFTTQTFDPEKNKNIDVKKEITKLKTVLSELKQSEKS 258

Query: 301 NEDREFLIRQQKVIQESIKTFVSDIDQVKISRTPHLDMTVIKNGSEISIFNLSQGEKTLI 360
           N+D      Q   ++ +I  F+     +++ R P L M+V KNG   ++  LSQGEK+L+
Sbjct: 259 NKDP-----QLDAVRHAIYRFMPGFFNLRVRRKPRLHMSVDKNGEAFNVLQLSQGEKSLM 313

Query: 361 ALVSDIARRLVILNPSLENPLNGYGIVLIDEIDLHLHPKWQQTIVQKLENTFPNIQFILS 420
           ALV DIARRL I+NP L+NPL+G GIVLIDE+D+HLHP WQ++I+++L  TFP+ QFIL+
Sbjct: 314 ALVGDIARRLAIMNPKLDNPLHGQGIVLIDEVDMHLHPSWQRSIIERLTTTFPHCQFILT 373

Query: 421 THSPLVLTTVTSEQIKIINELDYRFKLLSPTSNPFGKNASDALA-IMET 468
           THSPLV++      +  +N  +     L+   + +G++A+  L  +M+T
Sbjct: 374 THSPLVISDHKDVLVYSLNNGE-----LTVVPSQYGQDANSVLLDVMDT 417