Pairwise Alignments

Query, 540 a.a., recombinase RecF from Vibrio cholerae E7946 ATCC 55056

Subject, 450 a.a., hypothetical protein from Acinetobacter radioresistens SK82

 Score =  112 bits (279), Expect = 4e-29
 Identities = 119/481 (24%), Positives = 208/481 (43%), Gaps = 55/481 (11%)

Query: 62  IRLRNISLYDYKKFSKLKFTSSEKNTTIIIGNNGSGKSTILESISKCLQFLSDNIRIQNN 121
           ++L+++ L     F+ L+    E+  T+IIG+  SGK++IL++I + L +    ++    
Sbjct: 1   MKLKSVRLKHISHFTDLQLELDEQPLTLIIGDQASGKTSILKNIYQALTWFPARLKDLRT 60

Query: 122 NNYKFQDSEINIHSISGQTIVRCIL-----------EIENDFSFSCS------LTKNREN 164
                QD +I  + +  +  ++  L            ++   S  CS      L      
Sbjct: 61  AGVFIQDQDIMHNRLQAKVDIQVSLPAEIGNLAESSNVQATSSSLCSWQLYKTLNAQGTG 120

Query: 165 ISRKVSSELEEFKALARMYQRSNELDNNTLSYPLLAYYPVERSVTLKRDDAVKYYERKKA 224
           IS+  + +LE+   +  +YQ++   D   L  PL+AYYP ER                 +
Sbjct: 121 ISKVETVQLEQ---MVMLYQQAIRQDP-MLGLPLIAYYPSERFTN---------ETNLLS 167

Query: 225 KYSDKSEGLKNAFDGTS----NFNDFFSWYKEIDDIINEFKANDSITKEEIEYLLSKTDN 280
           K         +A+D  S     F  FF W +E+ D+ N  +      +   +Y  S  + 
Sbjct: 168 KNIPTIFQAASAYDLVSVPFTTFIRFFEWLREVSDVENA-RTTQLFHELLKQYHASTIEF 226

Query: 281 KEKIGSLISQLLEKKNNYNNNEDREFLIRQQKVIQESIKTFVSDIDQVKISRTPHLDMTV 340
           +  I  L +QL     +                ++ S++T + ++ ++ +   P L + V
Sbjct: 227 QHGISQLQTQLYAPCLS---------------ALKHSLQTVIPELTEIYLEYQPKLQLMV 271

Query: 341 IKNGSEISIFNLSQGEKTLIALVSDIARRLVILNP-SLENPLNGYGIVLIDEIDLHLHPK 399
           +  G  +    LS   KT IALV DI RRL +LNP SL   L G GI+LID ID HL  +
Sbjct: 272 VYAGKTLMFQQLSSTLKTWIALVGDIVRRLCLLNPLSLYPCLEGEGILLIDNIDAHLDLQ 331

Query: 400 WQQTIVQKLENTFPNIQFILSTHSPLVLTTVTSEQIKIINELDYRFKLLSPTSNPFGKNA 459
             Q I++ L+  FP +Q I +     +L T     +++ N   Y+ K  S T   F    
Sbjct: 332 SSQYILEGLKEAFPRLQIIATASQSELLETNPLYALRLDNRQLYK-KPESTTWTGFTTLY 390

Query: 460 SDALAIMETSESPLVHSEEILALIKKYESLVKRGQEDCRKTKEIKKRIESTGYTFDIADI 519
            D L   ET       +E   + + +   L+K  Q    + +E+ + I++  ++  I+D 
Sbjct: 391 QD-LEGQETLSDSANTNEAACSALPQIVELIK--QLSATEYEELLRLIKNGSHSLPISDA 447

Query: 520 E 520
           +
Sbjct: 448 D 448