Pairwise Alignments

Query, 323 a.a., RNA-directed DNA polymerase from Vibrio cholerae E7946 ATCC 55056

Subject, 398 a.a., Retron-type reverse transcriptase from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 41.2 bits (95), Expect = 4e-08
 Identities = 44/182 (24%), Positives = 81/182 (44%), Gaps = 20/182 (10%)

Query: 34  EVRGSHAYKVYSIPKRKAGRRTIAHPSSKLKICQRHLNAILNPLLK--VHDSSYAYVKGR 91
           E +     +VY IPK K G+R +  P+ + K+ Q  + ++L P+ +    + SY +   R
Sbjct: 68  EYKAPQIRRVY-IPKGKTGKRPLGIPTIEDKVLQPSVRSVLEPIYEEDFKEFSYGFRPNR 126

Query: 92  SIKD------NALVHSHSAYVLKMDFQNFFNSITPTILRQCL---IQNDILLSVNELEKL 142
           S           + +    Y++  D Q++F SI   +LR  L   +++ ++  +  L+K 
Sbjct: 127 SCHHAIEYMFEKVSYGRMRYIIDADIQDYFGSIDHGLLRVFLDRRVKDGVVRKM--LDKW 184

Query: 143 EQLIFWNPSKKRNGKLILSVGSPISPLISNAIM-YPFDKIIND----ICTKHGINYTRYA 197
            +       +    K     G  +SP++SN  + Y  D+  +D    + T       RYA
Sbjct: 185 LKAGILEDKQLHYPKGGTPQGGIVSPILSNIYLHYVLDEWFSDKIQPLLTGKSF-MVRYA 243

Query: 198 DD 199
           DD
Sbjct: 244 DD 245