Pairwise Alignments

Query, 261 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 259 a.a., membrane protein from Pseudomonas simiae WCS417

 Score =  191 bits (484), Expect = 2e-53
 Identities = 103/249 (41%), Positives = 146/249 (58%)

Query: 1   MELSLEVLGLLFLVAGVAGFIDAMAGGGGLLTLPALLAAGVPPTQALATNKLQSSFGSFS 60
           + + L  L +L +VA +AGFIDA+AGGGGLLT PALL AG+PP   L TNKL S+FGS +
Sbjct: 5   LSVDLTTLAILAIVAFIAGFIDAIAGGGGLLTTPALLTAGMPPHLVLGTNKLSSTFGSAT 64

Query: 61  ATLYFVRKGVVSLKAMRLAIACTFVGAALGAEAVQYIDATLLTSLIPLLLLGISLYFLLA 120
           A+  F R+ +   +    AI  T VGA  GA    Y+ A  L  ++P+++    +Y L  
Sbjct: 65  ASFTFYRRKLFHPRQWVHAIVGTLVGALTGAVVAHYLPAETLNKMLPVIVFACGVYLLFG 124

Query: 121 PTTKTHTGPAPLSETAFAFTVGFGIGFYDGFFGPGTGSIFTVCFVALGHFSLVEATARTK 180
            T K         +  +  T GF +GFYDG  GPGTG+ +TV  + L    LV+A+   +
Sbjct: 125 GTPKAPLDADAPIKKKWQSTQGFSLGFYDGVAGPGTGAFWTVSTMLLHPIDLVKASGVAR 184

Query: 181 VLNFTSNIAALTFFLIAGLPIWEIGLTMAVGGFIGARMGAKVVISKGQRWIRPLVITMSM 240
            +NF SN AALT F+I G   W +GL M +    GA  GA+  IS G ++IRP+ IT+ +
Sbjct: 185 SMNFVSNAAALTVFIINGSVDWIVGLAMGISVMCGAFFGARSAISGGAKFIRPVFITVVL 244

Query: 241 LMALKLLWE 249
            + ++L W+
Sbjct: 245 GLTVRLAWQ 253