Pairwise Alignments

Query, 261 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 253 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

 Score =  132 bits (333), Expect = 5e-36
 Identities = 81/246 (32%), Positives = 125/246 (50%), Gaps = 4/246 (1%)

Query: 8   LGLLFLVAGVAGFIDAMAGGGGLLTLPAL--LAAGVPPTQALATNKLQSSFGSFSATLYF 65
           + +L + A  AG IDA  GGGGL+ +PAL  +     P   L +NKL S  G+  A   F
Sbjct: 4   IAVLSVFAFAAGLIDAAVGGGGLIQIPALFNVLPSAQPAALLGSNKLASVCGTAFAARSF 63

Query: 66  VRKGVVSLKAMRLAIACTFVGAALGAEAVQYIDATLLTSLIPLLLLGISLYFLLAPTTKT 125
           +RK  +    +  A    FV +  GA  V  +  +++   + +L++ +++Y        T
Sbjct: 64  IRKVTLDWGLIVPAALSAFVMSFAGAATVSLVPPSVMRPAVLVLIVLMAVYTFCKKDFGT 123

Query: 126 HTGPAPLS--ETAFAFTVGFGIGFYDGFFGPGTGSIFTVCFVALGHFSLVEATARTKVLN 183
              PA +   E   A  +G  IGFYDG FGPGTGS     F+       + A+A  KV+N
Sbjct: 124 LHTPAQVGRKEQCLAVLIGGAIGFYDGLFGPGTGSFLIFLFIRFFALDFLHASASAKVVN 183

Query: 184 FTSNIAALTFFLIAGLPIWEIGLTMAVGGFIGARMGAKVVISKGQRWIRPLVITMSMLMA 243
             +N+AAL FF+  G  ++ I L MAV   +GA  G  + + KG  ++R L + +  ++ 
Sbjct: 184 IATNLAALVFFVPTGNVLYAIALPMAVCNILGALTGTWLAVRKGAGFVRGLFLVLLCVLI 243

Query: 244 LKLLWE 249
            KL W+
Sbjct: 244 AKLSWD 249