Pairwise Alignments

Query, 261 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 253 a.a., putative membrane transporter protein YfcA from Acinetobacter radioresistens SK82

 Score =  119 bits (298), Expect = 6e-32
 Identities = 81/248 (32%), Positives = 130/248 (52%), Gaps = 11/248 (4%)

Query: 1   MELSLEVLGLLFLVAGVAGFIDAMAGGGGLLTLPALLAAGVPPTQALAT----NKLQSSF 56
           M+++L +LGL    A   G IDA  GGGGL+ LPAL+ A   P  +LAT    NK+    
Sbjct: 1   MDITLILLGLF---AFCGGLIDAAVGGGGLVQLPALIHA--LPQYSLATVFGTNKIAVLA 55

Query: 57  GSFSATLYFVRKGVVSLKAMRLAIACTFVGAALGAEAVQYIDATLLTSLIPLLLLGISLY 116
           G+FS+   ++++  +  K +   +   F  A LGA +V  I   L+  ++  LL+ I++Y
Sbjct: 56  GTFSSIFTYIKRVKIVWKLIFPTMISAFTFAFLGAMSVSLIPKELMRYIVFCLLILIAIY 115

Query: 117 -FLLAPTTKTHTG-PAPLSETAFAFTVGFGIGFYDGFFGPGTGSIFTVCFVALGHFSLVE 174
            F+     KTHT       E       G  IGFYDG FGPG+GS     FV +  F  + 
Sbjct: 116 TFIKKDLGKTHTELQYGKKEIGLGILFGGLIGFYDGIFGPGSGSFLIFLFVRIFSFDFLN 175

Query: 175 ATARTKVLNFTSNIAALTFFLIAGLPIWEIGLTMAVGGFIGARMGAKVVISKGQRWIRPL 234
           A+A  K++N  +  A+L FF+ AG  +W++G  + +   +G+ +G  + +  G  +IR  
Sbjct: 176 ASASAKLVNLGTFTASLLFFIPAGHVLWKVGTFVGICNVLGSLVGTILALRYGSGFIRIF 235

Query: 235 VITMSMLM 242
            + + + +
Sbjct: 236 FLVLLIFL 243



 Score = 24.3 bits (51), Expect = 0.003
 Identities = 19/99 (19%), Positives = 38/99 (38%)

Query: 146 GFYDGFFGPGTGSIFTVCFVALGHFSLVEATARTKVLNFTSNIAALTFFLIAGLPIWEIG 205
           G  D   G G          AL  +SL       K+       +++  ++     +W++ 
Sbjct: 16  GLIDAAVGGGGLVQLPALIHALPQYSLATVFGTNKIAVLAGTFSSIFTYIKRVKIVWKLI 75

Query: 206 LTMAVGGFIGARMGAKVVISKGQRWIRPLVITMSMLMAL 244
               +  F  A +GA  V    +  +R +V  + +L+A+
Sbjct: 76  FPTMISAFTFAFLGAMSVSLIPKELMRYIVFCLLILIAI 114