Pairwise Alignments

Query, 286 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 314 a.a., HTH-type transcriptional regulator HdfR from Xanthobacter sp. DMC5

 Score = 55.1 bits (131), Expect = 2e-12
 Identities = 80/319 (25%), Positives = 130/319 (40%), Gaps = 49/319 (15%)

Query: 1   MLLEGIETLLVLSKEKTMSRTGSQLYISQSAVSKRIANLEKKLGKKLIVPAGRHIKLT-- 58
           M LE ++  + +++   M+R    L ++QSAVS  +A LE   G  L    GR I+LT  
Sbjct: 1   MTLEQLKVFVAVARALHMTRAAETLNMTQSAVSASVAALEASCGVALFHRVGRRIELTEA 60

Query: 59  -----ADAEQLIASIGPT---FNELHGLIFEQQTLEDNTLLRMDCSETLVAGYLGQTMGQ 110
                 +AE ++A  G       +L GL            L +  S+T+   +LG  + +
Sbjct: 61  GRVFVPEAEAVLARAGAAETILADLSGL--------RRGRLSIHASQTIANYWLGPLLHR 112

Query: 111 HRKQDPHWV--ITTNHTPRIVENVQSGKATLGFCAGYLPANHGLLTFHLGDEPFTVIS-- 166
             K  P     +   +T ++   V++G+A LGF  G +           GD    V++  
Sbjct: 113 FHKLYPDIALEVVIGNTAQVASAVRAGEADLGFVEGEVEEALLARVAVPGDRLVLVVAAH 172

Query: 167 --QAPLHAL-PSELITND--LANPA--------NTYQAAMLHKQGIRPAMEMDSYTAAAQ 213
             +A L AL P++LI     L  P         +  +A+ L    ++  +E+ S  A   
Sbjct: 173 DPRAELKALTPADLIDMPFVLREPGSGTRQVFEDALRASGLDPSQLKVVLELPSNEAVVS 232

Query: 214 LALGG----MLPALVPRS--IVSTLKIEPQHCFDFAELADLTRPIHICLRASRYRSSRVQ 267
               G    ++  LV  S   + TLK  P        L    R  +    A RY S   Q
Sbjct: 233 AVAAGAGATVISDLVTASGLAMGTLKQLP--------LTLPARRFYALRHADRYNSRAAQ 284

Query: 268 ALITALHDAVPKAVLAPSA 286
           AL+  + +      +AP+A
Sbjct: 285 ALLALVREPEAAPGIAPAA 303