Pairwise Alignments

Query, 286 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 288 a.a., transcriptional regulator from Pseudomonas simiae WCS417

 Score = 52.0 bits (123), Expect = 2e-11
 Identities = 64/291 (21%), Positives = 112/291 (38%), Gaps = 28/291 (9%)

Query: 1   MLLEGIETLLVLSKEKTMSRTGSQLYISQSAVSKRIANLEKKLGKKLIVPAGRHIKLTAD 60
           MLL  I  LL +++ +  +R    L++SQ  +S++I  LE  LG  L+  +GR ++LT  
Sbjct: 1   MLLRHIRYLLAVAEHRNFTRAAEALHVSQPTLSQQIKQLEDTLGAPLLDRSGRSVRLTDA 60

Query: 61  AEQLIASIGPTFNELHGLIFEQQTLEDNTL--LRMDCSETLVAGYLGQTMGQHRKQDPHW 118
            E  +        +L         ++D +   LR+  + T  A  +G  + Q  ++ P  
Sbjct: 61  GETYVRFARLALQDLQAGTRAMHDVQDLSRGNLRLAMTPTFTAYLVGPLLAQFNQRHPGI 120

Query: 119 VITTNHTPRIVENVQSGKATLGFCAGYLPANHGLLTFHLGD--------EPFTVISQAPL 170
            ++       +E +   +         L    G    HL D        E  + +  A  
Sbjct: 121 TVS-------IEELTQDRMETALAEDALDIGIGFTGEHLPDIECEGLFVETLSGVVGANH 173

Query: 171 HALPSE------LITNDLANPANTYQAAMLHKQGIRP--AMEMDSYTAAAQLALGGMLPA 222
             L S       L+  +       Y       QGI P  AME +S +A  ++     L  
Sbjct: 174 PGLDSRQWLTQPLVLLNQGFATRRYIDDYCRTQGINPVIAMEANSISAIIEIVRSTALAT 233

Query: 223 LVPRSIVSTLKIEPQHCFDFAELADLTRPIHICLRASRYRSSRVQALITAL 273
           L+P +I    + +P         A   R + +  R   YRS+  +A +  +
Sbjct: 234 LLPSAIA---QAQPGLNAVAISPALPQRTVALLSRKGAYRSAACRAFVALI 281