Pairwise Alignments

Query, 206 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 231 a.a., trimeric intracellular cation channel family protein from Rhodanobacter sp000427505 FW510-R12

 Score =  125 bits (314), Expect = 6e-34
 Identities = 75/198 (37%), Positives = 113/198 (57%), Gaps = 9/198 (4%)

Query: 5   LLYLIDMFGTAVFAVSGVLLAGRLKMDPFGVMVLASVTAIGGGTIRDMALGATPVFWIKD 64
           L  ++D+ GT VFA+SG ++A R ++D FGV+VLA      GG  RD+ +GA P   I D
Sbjct: 15  LQLVLDLGGTFVFAISGAMVAVRHRLDIFGVLVLAFAAGNAGGITRDLLIGAVPPAAIAD 74

Query: 65  TNYLWVIMITCALTML---LVRRPKRLAWWILPVCDAIGLAVFVGIGVEKALIYQDSALI 121
             Y  V  +   +T     +  R +R   W+    DA+GLA F   G +KAL++    ++
Sbjct: 75  LRYSGVSALAGLITFFWYPVTNRLRRDVLWL----DAVGLAFFAVAGAQKALLHGIDPVM 130

Query: 122 AIIMGVITGCGGGIIRDVLAREIPMVLRSEVYATACIIGGIFHTTALAMGYSSSTALLSG 181
           A ++G++TG GGG++RDVL  +IP VLR+++YA A + G     +A  +  S   A L+G
Sbjct: 131 AALLGMVTGIGGGMLRDVLVSDIPAVLRADLYALAALAGAGVVVSAHLLHLSPMVAALAG 190

Query: 182 VFSTLLIRLGAIR--WHL 197
                ++R  AIR  WHL
Sbjct: 191 GGLCFVLRFMAIRHGWHL 208