Pairwise Alignments

Query, 206 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 209 a.a., putative membrane protein from Alteromonas macleodii MIT1002

 Score =  147 bits (371), Expect = 1e-40
 Identities = 74/202 (36%), Positives = 120/202 (59%), Gaps = 1/202 (0%)

Query: 1   MDTSLLYLIDMFGTAVFAVSGVLLAGRLKMDPFGVMVLASVTAIGGGTIRDMALGATPVF 60
           M T    ++ + G A FAVSG LL     ++ FG++V+  +TA+GGGT+RD+ LG  P+F
Sbjct: 1   MSTEYFIVLGVVGVAFFAVSGALLGHDKSINGFGIVVVGVMTALGGGTLRDLLLGK-PIF 59

Query: 61  WIKDTNYLWVIMITCALTMLLVRRPKRLAWWILPVCDAIGLAVFVGIGVEKALIYQDSAL 120
           W++ + YL         T+L +R     + +   + D IGLA+F  IG+EKALI     +
Sbjct: 60  WVETSEYLLATYSAIFATVLFIRYMPSPSNFYFILIDTIGLAIFNVIGIEKALISGTGMI 119

Query: 121 IAIIMGVITGCGGGIIRDVLAREIPMVLRSEVYATACIIGGIFHTTALAMGYSSSTALLS 180
           +A+ MG+ TG  GG++RDV+ RE+P V+R +VYA+AC  GG+ +    A+       +L 
Sbjct: 120 VALTMGMTTGIFGGLMRDVVCREVPYVMRGDVYASACFAGGLTYAALFALDIPYIWCILG 179

Query: 181 GVFSTLLIRLGAIRWHLSLPTF 202
            +  T+L+R+ ++ W + +  F
Sbjct: 180 SISVTVLMRIASLHWGVKVDLF 201