Pairwise Alignments

Query, 470 a.a., glutamate synthase small subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 455 a.a., dihydropyrimidine dehydrogenase from Pseudomonas simiae WCS417

 Score =  185 bits (469), Expect = 3e-51
 Identities = 140/443 (31%), Positives = 210/443 (47%), Gaps = 26/443 (5%)

Query: 28  FVEIYEPFTKQQATAQADRCLDCGNPYCEWKCPVHNYIPQWLKLANEGRILEAADLAHQT 87
           F ++  P   +QA  +A RCL C +  C   CP    IP +++  +   +  AA      
Sbjct: 22  FTDLAPPLNARQAQLEASRCLYCYDAPCVNACPSEIDIPSFIRNIHTENVQGAAQKILSA 81

Query: 88  NSLPEVCGRVCPQDRLCEGSCTLN--ADFGAVTIGNIEKYITDTAFEMGWKPDMSNVVWT 145
           N L   C RVCP + LC+ +C  N   +   V IG +++Y  D A     +        T
Sbjct: 82  NILGGSCARVCPTEILCQQACVRNNAEECAPVLIGLLQRYAVDNAHFT--EHPFHRAAST 139

Query: 146 DKKVAIIGAGPAGLAAADILVRNGVRPVVFDRYPEIGGLLTFGIPSFKLEKGVMENRRRI 205
            K++A++GAGPAGLA A     +G   V+F+   + GGL  +GI  +KL     +     
Sbjct: 140 GKRIAVVGAGPAGLACAHRSSLHGHDVVIFEAREKAGGLNEYGIAKYKLVDDFAQKELDF 199

Query: 206 FSEM-GIEFRLNVEVGQDITLQQLLDEYDAVFLGVGTYQYMRAGLANEDAPGVYDALPFL 264
             ++ GIE R    +G ++TL +L  ++D+VFLG+G     + GL +EDAPG       L
Sbjct: 200 LLQIGGIEIRHGQRLGDNLTLSELHQQFDSVFLGLGLAASKQLGLPHEDAPG-------L 252

Query: 265 ISNTYKVMELNNEAPFIDMAGKN-VVVLGGGDTAMDCVRTSIRQGASRVICAYRRDEENM 323
           ++ T  + EL        +   N  +VLG G+TA+D      R GA  V   YRR   +M
Sbjct: 253 LAATDYIRELRQADDLTQLPLANRCIVLGAGNTAIDMAVQMARLGAHDVNLVYRRGLADM 312

Query: 324 PGSRREVKNAKEEGVEFMFNLQPLGIEVNAQGQVTGVKVVKTALGEPDAAGRRKPEPVAG 383
             +  E   AK   V  +   QP  + ++ QG V G++ ++T +      GR  P    G
Sbjct: 313 GATHHEQDIAKANQVRLLTWAQPKEVLLDDQGHVRGMRFLRTRMEN----GRLLP---TG 365

Query: 384 SEHVLPADAVIMAFGFQPHKMAWLEPFDVELDQWG-RIKAPAKQTYQYQTTNPKIFAGGD 442
               L ADA+  A G      A  +P   +L + G RI        Q +T+ P ++AGGD
Sbjct: 366 ETFELAADAIFKAIGQGFDNEALHDPLAQQLHRVGERIFVDE----QLRTSIPGVYAGGD 421

Query: 443 AVR-GSDLVVTAIDEGRKAAEGI 464
            V  G DL V A+  G+ AAE +
Sbjct: 422 CVSLGQDLTVQAVQHGKLAAEAM 444