Pairwise Alignments

Query, 470 a.a., glutamate synthase small subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 456 a.a., NAD-dependent dihydropyrimidine dehydrogenase subunit PreT (EC 1.3.1.1) from Variovorax sp. SCN45

 Score =  215 bits (548), Expect = 2e-60
 Identities = 161/460 (35%), Positives = 233/460 (50%), Gaps = 32/460 (6%)

Query: 9   IDVNRVDPAKKPLHIRKIEFVEIYEPFTKQQATAQADRCLDCGNPYCEWKCPVHNYIPQW 68
           +   R+DPA+   +     F + + P    QA  +A+RC  C +  C+  CP    IP +
Sbjct: 18  VRAGRLDPAQYAKN-----FCDAHPPLNVVQANIEAERCYYCYDAPCQTACPTGIDIPTF 72

Query: 69  LKLANEGRILEAADLAHQTNSLPEVCGRVCPQDRLCEGSCTLNADFGA-VTIGNIEKYIT 127
           ++   +G +  AA    + N L  +C RVCP + LCE +C  N +    V IG ++++ T
Sbjct: 73  IRRIADGNLRGAARTILEENPLGGMCARVCPTEVLCEQACVRNTNESKPVEIGLLQRHAT 132

Query: 128 DTAFEMGWKPDMSNVVWTDKKVAIIGAGPAGLAAADILVRNGVRPVVFDRYPEIGGLLTF 187
           D  FE    P       T ++VA++GAGPAGLA A  L   G + V+FD  P++GGL  +
Sbjct: 133 DAFFEKPGTPLFVRAADTGRRVAVVGAGPAGLACAHRLAVLGHQVVLFDARPKLGGLNEY 192

Query: 188 GIPSFKLEKGVMENR-RRIFSEMGIEFRLNVEVGQDITLQQLLDEYDAVFLGVGTYQYMR 246
           G+ S+K   G  +     + S  GIE R N  +G+++ L  L  EYDAVFLG+G      
Sbjct: 193 GLASYKTVNGFAQREIEWLLSVGGIEVRCNHALGRELHLDALAAEYDAVFLGLGLAGVNA 252

Query: 247 AGLANEDAPGVYDALPFLISNTYKVMELNNEAPFIDMA-GKNVVVLGGGDTAMDCVRTSI 305
            GL  +   GV DA+ F       + EL   A   D+A G++VVV+GGG TA+D    S 
Sbjct: 253 LGLGEQ--TGVRDAVDF-------IAELRQAASPADVAIGRHVVVIGGGMTAVDAAVQSR 303

Query: 306 RQGASRVICAYRRDEENMPGSRREVKNAKEEGVEFMFNLQPLGIEVNAQGQVTGVKVVKT 365
           + GA  V   YRR +E+M  S  E   AKE GV  +    P  +     G + G+   +T
Sbjct: 304 KLGAEDVSIVYRRGQESMGASADEQSWAKENGVRIIHWAAPKALRAKG-GVLRGIDFART 362

Query: 366 ALGEPDAAGRRKPEPVAGSEHVLPADAVIMAFGFQPHKMAWLEPFDVELDQWGRIKAPAK 425
           AL     AG +  E   G    L AD V+ A G Q      LE   V+L Q GRI     
Sbjct: 363 AL-----AGGKLVE--TGESLALQADMVLCAIG-QSFIATVLEDSGVQL-QGGRISTDT- 412

Query: 426 QTYQYQTTNPKIFAGGDA-VRGSDLVVTAIDEGRKAAEGI 464
              + +++  K++AGGDA   G DL V A+++G++AA  I
Sbjct: 413 ---EGRSSRSKVWAGGDARFGGRDLTVEAVEDGKQAALSI 449