Pairwise Alignments

Query, 470 a.a., glutamate synthase small subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 455 a.a., Glutamate synthase [NADPH] small chain from Pseudomonas sp. DMC3

 Score =  190 bits (482), Expect = 1e-52
 Identities = 140/443 (31%), Positives = 213/443 (48%), Gaps = 26/443 (5%)

Query: 28  FVEIYEPFTKQQATAQADRCLDCGNPYCEWKCPVHNYIPQWLKLANEGRILEAADLAHQT 87
           F ++  P   +QA  +A RCL C +  C   CP    IP +++  ++  +  AA      
Sbjct: 22  FTDLAPPLNSRQAHLEASRCLYCYDAPCVNACPSEIDIPSFIRNIHQDNVQGAAQKILSA 81

Query: 88  NSLPEVCGRVCPQDRLCEGSCTLN--ADFGAVTIGNIEKYITDTAFEMGWKPDMSNVVWT 145
           N L   C RVCP + LC+ +C  N   +   V IG +++Y  D A     +        T
Sbjct: 82  NILGGSCARVCPTEILCQQACVRNNAQECAPVLIGLLQRYAVDNAHFA--EHPFQRAPAT 139

Query: 146 DKKVAIIGAGPAGLAAADILVRNGVRPVVFDRYPEIGGLLTFGIPSFKLEKGVMENRRRI 205
            K++A++GAGPAGL+ A     +G   V+F+   + GGL  +GI  +KL     +     
Sbjct: 140 GKRIAVVGAGPAGLSCAHRSAMHGHDVVIFEAREKAGGLNEYGIAKYKLVDDYAQKELDF 199

Query: 206 FSEM-GIEFRLNVEVGQDITLQQLLDEYDAVFLGVGTYQYMRAGLANEDAPGVYDALPFL 264
             ++ GIE R   ++G ++TL +L  ++DAVFLG+G     + GLA+EDAPG       L
Sbjct: 200 LLQIGGIEIRHGQKLGANLTLSELHQQFDAVFLGLGLNASKQLGLAHEDAPG-------L 252

Query: 265 ISNTYKVMELNNEAPFIDM-AGKNVVVLGGGDTAMDCVRTSIRQGASRVICAYRRDEENM 323
           ++ T  + EL        +   +  +VLG G+TA+D      R GA  V   YRR   +M
Sbjct: 253 LAATDYIRELRQADDLTQLPLAERCIVLGAGNTAIDMAVQMARLGARDVNLVYRRGAADM 312

Query: 324 PGSRREVKNAKEEGVEFMFNLQPLGIEVNAQGQVTGVKVVKTALGEPDAAGRRKPEPVAG 383
             +  E   AK   V  +   QP  + ++ QG+V G++  +T L E    GR +     G
Sbjct: 313 GATHHEQDIAKANQVRLLTWAQPEQVLLDDQGRVRGMRFARTDLVE----GRLQ---TTG 365

Query: 384 SEHVLPADAVIMAFGFQPHKMAWLEPFDVELDQWG-RIKAPAKQTYQYQTTNPKIFAGGD 442
               L ADA+  A G      A  +P   EL + G RI+         +T+ P ++AGGD
Sbjct: 366 ETFELAADAIFKAIGQSFDDNALSDPLARELKRQGERIEVDE----HLRTSVPGVYAGGD 421

Query: 443 AVR-GSDLVVTAIDEGRKAAEGI 464
                 DL V A+  G++AAE I
Sbjct: 422 CTSLDQDLTVQAVQHGKRAAEAI 444