Pairwise Alignments

Query, 470 a.a., glutamate synthase small subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 472 a.a., glutamate synthase subunit GltD from Escherichia coli ECRC62

 Score =  734 bits (1896), Expect = 0.0
 Identities = 359/472 (76%), Positives = 400/472 (84%), Gaps = 2/472 (0%)

Query: 1   MSQNVYQFIDVNRVDPAKKPLHIRKIEFVEIYEPFTKQQATAQADRCLDCGNPYCEWKCP 60
           MSQNVYQFID+ RVDP KKPL IRKIEFVEIYEPF++ QA AQADRCL CGNPYCEWKCP
Sbjct: 1   MSQNVYQFIDLQRVDPPKKPLKIRKIEFVEIYEPFSEGQAKAQADRCLSCGNPYCEWKCP 60

Query: 61  VHNYIPQWLKLANEGRILEAADLAHQTNSLPEVCGRVCPQDRLCEGSCTLNADFGAVTIG 120
           VHNYIP WLKLANEGRI EAA+L+HQTN+LPEVCGRVCPQDRLCEGSCTLN +FGAVTIG
Sbjct: 61  VHNYIPNWLKLANEGRIFEAAELSHQTNTLPEVCGRVCPQDRLCEGSCTLNDEFGAVTIG 120

Query: 121 NIEKYITDTAFEMGWKPDMSNVVWTDKKVAIIGAGPAGLAAADILVRNGVRPVVFDRYPE 180
           NIE+YI D AFEMGW+PDMS V  T KKVAIIGAGPAGLA AD+L RNGV+ VVFDR+PE
Sbjct: 121 NIERYINDKAFEMGWRPDMSGVKQTGKKVAIIGAGPAGLACADVLTRNGVKAVVFDRHPE 180

Query: 181 IGGLLTFGIPSFKLEKGVMENRRRIFSEMGIEFRLNVEVGQDITLQQLLDEYDAVFLGVG 240
           IGGLLTFGIP+FKLEK VM  RR IF+ MGIEF+LN EVG+D+ L  LL +YDAVFLGVG
Sbjct: 181 IGGLLTFGIPAFKLEKEVMTRRREIFTGMGIEFKLNTEVGRDVQLDDLLSDYDAVFLGVG 240

Query: 241 TYQYMRAGLANEDAPGVYDALPFLISNTYKVMEL--NNEAPFIDMAGKNVVVLGGGDTAM 298
           TYQ MR GL NEDA GVY ALPFLI+NT ++M      + PF+ M GK VVVLGGGDTAM
Sbjct: 241 TYQSMRGGLENEDADGVYAALPFLIANTKQLMGFGETRDEPFVRMEGKRVVVLGGGDTAM 300

Query: 299 DCVRTSIRQGASRVICAYRRDEENMPGSRREVKNAKEEGVEFMFNLQPLGIEVNAQGQVT 358
           DCVRTS+RQGA  V CAYRRDEENMPGSRREVKNA+EEGVEF FN+QPLGIEVN  G+V+
Sbjct: 301 DCVRTSVRQGAKHVTCAYRRDEENMPGSRREVKNAREEGVEFKFNVQPLGIEVNGNGKVS 360

Query: 359 GVKVVKTALGEPDAAGRRKPEPVAGSEHVLPADAVIMAFGFQPHKMAWLEPFDVELDQWG 418
           GVK+V+T +GEPDA GRR+ E VAGSEH++PADAVIMAFGF+PH M WL    VELD  G
Sbjct: 361 GVKMVRTEMGEPDAKGRRRAEIVAGSEHIVPADAVIMAFGFRPHNMEWLAKHSVELDSQG 420

Query: 419 RIKAPAKQTYQYQTTNPKIFAGGDAVRGSDLVVTAIDEGRKAAEGILDYLGV 470
           RI AP      +QT+NPKIFAGGD VRGSDLVVTAI EGRKAA+GI+++L V
Sbjct: 421 RIIAPEGSDNAFQTSNPKIFAGGDIVRGSDLVVTAIAEGRKAADGIMNWLEV 472