Pairwise Alignments
Query, 1487 a.a., glutamate synthase large subunit from Vibrio cholerae E7946 ATCC 55056
Subject, 1567 a.a., Ferredoxin-dependent glutamate synthase 1 from Xanthobacter sp. DMC5
Score = 1259 bits (3257), Expect = 0.0
Identities = 701/1521 (46%), Positives = 951/1521 (62%), Gaps = 68/1521 (4%)
Query: 3 LYDPSLEKDNCGFGLIAHMEGQASHKLVRTAISALDRMTHRGGIAADGKTGDGCGLLLQK 62
L+DP+ E+D CG G IA ++G+ SH++V+ I+ L + HRG + AD + GDG G+L+Q
Sbjct: 35 LFDPAHERDACGVGFIADIKGRKSHRIVQDGINILLNLEHRGAVGADPRAGDGAGMLVQI 94
Query: 63 PDSYLRLIAEEQHWKLSK--QYAIGMLFLSRDPHKAQLAQQIVNQELAKETLSVAGWRKV 120
P + A L + +YA+G +F+ RD + + + +A+E + GWR V
Sbjct: 95 PHKFFAKEAARLGITLPEPGEYAVGHIFMPRDAEGEAIVRAAYERVVAEEGFVLIGWRDV 154
Query: 121 PTNPKVLGPIALDSLPDIQQVFISAPAGWRERD-VERRLYIARRRIEKQITDDRD----- 174
PT+ LG L + P Q+FI + D ERRL++ R+ I + +D
Sbjct: 155 PTDNSSLGVSVLPTEPKHVQIFIGRGEFAGDEDGFERRLFVLRKVISNTVYGAKDPRTAG 214
Query: 175 FYICSLSTQVLVYKGLCMPADLPRFYLDLADLRMESAICLFHQRFSTNTQPRWPLAQPFR 234
+Y SLS + LVYKG+ + L +Y DL D ESA+ L HQRFSTNT P WPLA P+R
Sbjct: 215 YYPVSLSCRTLVYKGMFLADQLGAYYPDLHDPDFESALALVHQRFSTNTFPAWPLAHPYR 274
Query: 235 YLAHNGEINTIEGNRQWARARAYKFASPLL-PDLQSAAPFVNETGSDSSSLDNMLDLFLA 293
+AHNGEINT+ GN W AR S L D+ P E SD++ DN L+ +
Sbjct: 275 MVAHNGEINTLRGNVNWMAARQASVDSELFGADISKLWPISYEGQSDTACFDNALEFLVQ 334
Query: 294 GGMDIFRAMRMLVPPAWQNHPDMDPDLRAFYDFNSKHMEPWDGPAGIVLSDGRYAACNLD 353
GG + A MLVP AW +P MD + RAFY++++ MEPWDGPA IV +DGR LD
Sbjct: 335 GGYSLPHAAMMLVPEAWAGNPLMDEERRAFYEYHASLMEPWDGPAAIVATDGRQIVATLD 394
Query: 354 RNGLRPARYVITKDKLITLASEVGIWDYAPDEVSEKGRVGPGELLVIDTRKGKIWQSSEI 413
RNGLRPARY++T D I LASE+G+ +++ K R+ PG++L++D +G++ EI
Sbjct: 395 RNGLRPARYMVTSDDTIVLASEMGVLTLPEEKIVTKWRLQPGKMLLVDLEEGRLVPDEEI 454
Query: 414 DNDLKSRHPYREWMENNVHKLTPFSQLPDDKVGERSFDADLLKTYQKQFAMSNEEIDQIL 473
+L +PY+EW++ H L + E D LL Q+ F + E++ ++
Sbjct: 455 KTELARANPYKEWLK---HTQLVLEDLRPVEAREVRTDVSLLDR-QQAFGYTQEDLKLLM 510
Query: 474 RVLGDMAQEAVGSMGDDTPMAVLSSKERLISDYFRQKFAQVTNPPIDPLREKHVMSLATS 533
+ QEAVGSMG DTP++VLS+K + + YF+Q FAQVTNPPIDP+RE+ VMSL +
Sbjct: 511 APMAITGQEAVGSMGTDTPISVLSNKSKSLFSYFQQNFAQVTNPPIDPIREELVMSLVSF 570
Query: 534 IGQEMNVFCETDGHAHRVTFD--SPILLYSDMQQLLTLS--DQHYRNTILDINFDPQEKN 589
IG N+F + +G+A R + PIL D++++ ++ ++ + LDI + P +K
Sbjct: 571 IGPRPNIF-DLEGNARRKRLEVRQPILTNEDLEKIRSIGFMEERFDTRTLDITY-PSDKG 628
Query: 590 ---LKQAVLDLCDKAEQVVREGTVLVVLSDRALTADRLPIPAAMAVGAVQARLVEANLRC 646
++ AV LC++AE V G +++LSDR + DR+PIPA +A AV L+ LR
Sbjct: 629 AAGMEDAVERLCERAEAAVHGGYNIIILSDRMIGPDRIPIPALLATAAVHHHLIRKGLRT 688
Query: 647 DANIIIETGAARDPHHFAVLIGFGATAVYPYLAYETLGKMIDDGALQKSYREVMQNYQYG 706
++IETG AR+ HHFA L G+GA A+ PYLA+ETL M D+ + +E+++ +
Sbjct: 689 SVGLVIETGEAREVHHFACLAGYGAEAINPYLAFETLLSMKDEIPEEVDDKEIVKRFIKS 748
Query: 707 INKGLYKIMSKMGISTVASYRCSQLFEAVGLHRDVVDLCFKGVTTRIQGANFDDFEQDLF 766
I+KGL K+MSKMGIST SY +Q+F+AVGL DVV F G T I+G + ++
Sbjct: 749 IDKGLLKVMSKMGISTYQSYCGAQIFDAVGLSSDVVSKYFFGTATTIEGVGLPEIAEETV 808
Query: 767 NLSRKAWAK----RKPLEHGGLLKYVHGGEYHAYNPDVVGTLQKAVKSGEIMDYREFAQQ 822
A++ R L+ GG Y GE HA++PD V TLQ AV+ Y+ FA
Sbjct: 809 RRHTLAFSDAPIFRMALDVGGEYAYRIRGEDHAWSPDSVATLQHAVRGNAQDKYKAFAAM 868
Query: 823 VNQRPVAML--RDLLRLKTSDK----PLPLEHIEPASDLYKRFDSAAMSIGALSPEAHEA 876
+N+ +L R L R+K +++ + + +EPAS++ KRF + AMS G++S EAH
Sbjct: 869 INEEDKRLLTVRSLFRIKGAEEIGQASVDISEVEPASEIVKRFVTGAMSFGSISREAHTT 928
Query: 877 LATAMNRLGGYSNSGEGGEDPRRF-----GTERNSRIKQVASGRFGVTPHYLTNADVLQI 931
LA AMNR+GG SN+GEGGE+P RF G S IKQVASGRFGVT YL N+DV+QI
Sbjct: 929 LAIAMNRIGGKSNTGEGGEEPERFKPLPNGDSMRSAIKQVASGRFGVTAEYLVNSDVMQI 988
Query: 932 KVAQGAKPGEGGQLPGHKVTAEIAKLRYSVPGVTLISPPPHHDIYSIEDLAQLIFDLKQI 991
KVAQGAKPGEGGQLPGHKV A IAK+R+S PGV LISPPPHHDIYSIEDLAQLI+DLK +
Sbjct: 989 KVAQGAKPGEGGQLPGHKVDAVIAKVRHSTPGVGLISPPPHHDIYSIEDLAQLIYDLKNV 1048
Query: 992 NPKALVSVKLVSEPGVGTIATGVAKAYADLITISGYDGGTAASPLTSVKYAGSPWELGLA 1051
NP A VSVKLVSE GVGT+A GVAKA AD ITISG++GGT ASPLTS+K+AGSPWE+GLA
Sbjct: 1049 NPDADVSVKLVSEVGVGTVAAGVAKARADHITISGFEGGTGASPLTSIKHAGSPWEMGLA 1108
Query: 1052 ETQQALVANGLRHKIRLQVDGGLKTGLDVIKGAILGAESFGFGTAPMVAMGCKFLRICHL 1111
ETQQ LVAN LR ++ LQVDGGL+TG DV+ GA+LGA+ F F TAP++A GC +R CHL
Sbjct: 1109 ETQQTLVANRLRSRVALQVDGGLRTGRDVVIGALLGADEFAFSTAPLIAAGCIMMRKCHL 1168
Query: 1112 NNCATGVATQDETLRKDYFKGLPEMVMNYFKGLAEEVRGYLAELGVEKLTDLIGRTDLLE 1171
N C GVATQD LRK FKG PE V+NYF +AEEVR +A LG K+ +++GR D+L+
Sbjct: 1169 NTCPVGVATQDPVLRK-RFKGTPEHVINYFFFIAEEVRELMASLGFRKVEEMVGRADVLD 1227
Query: 1172 VVEGMTAKQSK-LDLSDLLEAPVSPQNLPLYCTE-PNTPFDKGALNQKIVEDALAAVENQ 1229
+ ++K LD S + P P ++ + TE + P +K L++ ++ A A+E
Sbjct: 1228 QKAAIDHWKAKGLDFSRIFAVPQMPADVGIRHTERQHHPIEK-VLDRTLIAKAAPALERG 1286
Query: 1230 QSLELYYNVINTDRSIGARLSGEIAKRYGNLGVATSPIKVVLNGTAGQSFGVWNAGGLEL 1289
+ +E+ + + DRS GA LSG +AK YG G+ I V L+GTAGQ+FG + A G+
Sbjct: 1287 ERVEIETPIRSVDRSAGAMLSGAVAKAYGGAGLPDDTIHVTLSGTAGQAFGAFLAAGVTF 1346
Query: 1290 YLTGDANDYVGKGMAGGKIVIRPHQGTAFVCNEATIIGNTCLYGATGGKLFAAGKAGERF 1349
L G+ANDYVGKG++GG+I++RP +A V + I+GNT +YGAT G+ + G AGERF
Sbjct: 1347 DLVGEANDYVGKGLSGGRIIVRPPAHSAIVPENSIIVGNTVMYGATEGECYFHGIAGERF 1406
Query: 1350 AVRNSGTIAVIEGAGDNACEYMTGGIVAILGATGVNFGAGMTGGFAYVLDENGDFQGRVN 1409
AVRNSG IAV+EG GD+ CEYMTGGIV ++G TG NF AGM+GG AYVLDE+ F R N
Sbjct: 1407 AVRNSGAIAVVEGTGDHGCEYMTGGIVVVIGPTGRNFAAGMSGGVAYVLDEDKSFAKRCN 1466
Query: 1410 DESV-------EAVALTDLYIH--------------------QEHLRGLIAEHLEETGSA 1442
V E L L+ H +E L LIA+HL TGSA
Sbjct: 1467 LSMVDLEPVEEEEDLLERLHHHGGDLEFKGRIDVQGDMSRHDEERLHQLIAKHLHHTGSA 1526
Query: 1443 HAERILANFDEWIPKFYLIKP 1463
A+ IL N+ ++ KF + P
Sbjct: 1527 RAQMILDNWADYRSKFVKVMP 1547