Pairwise Alignments

Query, 1487 a.a., glutamate synthase large subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 1481 a.a., glutamate synthase from Pseudomonas simiae WCS417

 Score = 1818 bits (4709), Expect = 0.0
 Identities = 901/1474 (61%), Positives = 1130/1474 (76%), Gaps = 9/1474 (0%)

Query: 3    LYDPSLEKDNCGFGLIAHMEGQASHKLVRTAISALDRMTHRGGIAADGKTGDGCGLLLQK 62
            LY P   KDNCGFGLIAHM+G+ SH L++TAI AL  MTHRGGI ADGKTGDGCGLL+QK
Sbjct: 5    LYQPDEFKDNCGFGLIAHMQGEPSHTLLQTAIEALTCMTHRGGINADGKTGDGCGLLIQK 64

Query: 63   PDSYLRLIAEEQHW-KLSKQYAIGMLFLSRDPHKAQLAQQIVNQELAKETLSVAGWRKVP 121
            PD +LR +A+EQ    L KQYA+GM+F ++DP KA+ A++ +N+E+    L + GWRKVP
Sbjct: 65   PDQFLRAVAKEQFAVDLPKQYAVGMVFFNQDPVKAEAARENMNREILAAGLQLVGWRKVP 124

Query: 122  TNPKVLGPIALDSLPDIQQVFISAPAGWRERDVERRLYIARRRIEKQITDDRDFYICSLS 181
             +  VLG +A + LP I+QVFI A  G  ++D+  +L+ +RRR       D D YICS S
Sbjct: 125  IDTSVLGRLANERLPQIEQVFI-AGEGLSDQDMAIKLFTSRRRSSVANAADTDHYICSFS 183

Query: 182  TQVLVYKGLCMPADLPRFYLDLADLRMESAICLFHQRFSTNTQPRWPLAQPFRYLAHNGE 241
             + ++YKGL MPADL  FY DL+D R+++AIC+FHQRFSTNT P+WPLAQPFR+LAHNGE
Sbjct: 184  HKTIIYKGLMMPADLTAFYPDLSDERLQTAICVFHQRFSTNTLPKWPLAQPFRFLAHNGE 243

Query: 242  INTIEGNRQWARARAYKFASPLLPDLQSAAPFVNETGSDSSSLDNMLDLFLAGGMDIFRA 301
            INTI GNR WA AR  KFA+ L+ DL+   P VN  GSDSSS+DNML+L + GG+D+FR 
Sbjct: 244  INTITGNRNWAVARRTKFANDLM-DLEELGPLVNRVGSDSSSMDNMLELMVTGGIDLFRG 302

Query: 302  MRMLVPPAWQNHPDMDPDLRAFYDFNSKHMEPWDGPAGIVLSDGRYAACNLDRNGLRPAR 361
            +RM++PPAWQN   MDPDLRAFY++NS HMEPWDGPAG+V++DGRYA C LDRNGLRPAR
Sbjct: 303  VRMIIPPAWQNVETMDPDLRAFYEYNSMHMEPWDGPAGVVMTDGRYAVCLLDRNGLRPAR 362

Query: 362  YVITKDKLITLASEVGIWDYAPDEVSEKGRVGPGELLVIDTRKGKIWQSSEIDNDLKSRH 421
            +V T +  ITLASE+G+W+Y P++V  KGRVGPG++L +DT  G+I  +  IDN LKSRH
Sbjct: 363  WVTTTNGFITLASEIGVWNYKPEDVIAKGRVGPGQILAVDTETGQILDTDAIDNRLKSRH 422

Query: 422  PYREWMENNVHKLTPFSQLPDDKVGERSFDADLLKTYQKQFAMSNEEIDQILRVLGDMAQ 481
            PY++W+  N  ++   + + D+  G   +D D LK Y K + ++ EE DQ+LR LG+   
Sbjct: 423  PYKQWLRKNALRIQ--ATMEDNDHGSAFYDVDQLKQYMKMYQVTFEERDQVLRPLGEQGY 480

Query: 482  EAVGSMGDDTPMAVLSSKERLISDYFRQKFAQVTNPPIDPLREKHVMSLATSIGQEMNVF 541
            EAVGSMGDDTPMAVLS + R   DYFRQ+FAQVTNPPIDPLRE  VMSL   +G E N+F
Sbjct: 481  EAVGSMGDDTPMAVLSQRVRTPYDYFRQQFAQVTNPPIDPLREAIVMSLEVCLGAERNIF 540

Query: 542  CETDGHAHRVTFDSPILLYSDMQQLLTLSDQHYRNTILDINFDPQEKNLKQAVLDLCDKA 601
             E+  HA RV   SP++  +  + L+TL    +   I+D+N+D +   L+ AV ++ D+A
Sbjct: 541  QESPEHASRVILSSPVVSPAKWRSLMTLERPGFDRQIIDLNYD-ESLGLEAAVRNVADQA 599

Query: 602  EQVVREGTVLVVLSDRALTADRLPIPAAMAVGAVQARLVEANLRCDANIIIETGAARDPH 661
            E+ VR G   +VL+DR +   +LPI A++A GAV  RL E  LRCD+NI++ET  ARDPH
Sbjct: 600  EEAVRAGRTQIVLTDRHIAPGKLPIHASLATGAVHHRLTEKGLRCDSNILVETATARDPH 659

Query: 662  HFAVLIGFGATAVYPYLAYETLGKMIDDGALQKSYREVMQNYQYGINKGLYKIMSKMGIS 721
            HFAVLIGFGA+AVYP+LAYE LG +I  G +     EV +NY+ GI KGL KI+SKMGIS
Sbjct: 660  HFAVLIGFGASAVYPFLAYEVLGDLIRTGEVLGDLYEVFKNYRKGITKGLLKILSKMGIS 719

Query: 722  TVASYRCSQLFEAVGLHRDVVDLCFKGVTTRIQGANFDDFEQDLFNLSRKAWAKRKPLEH 781
            TV SYR +QLFEA+GL  +V DL F+GV +RI+GA F D E +   L+ +AW+ RKP++ 
Sbjct: 720  TVTSYRGAQLFEAIGLSEEVCDLSFRGVPSRIKGARFVDIEAEQKALAAEAWSARKPIQQ 779

Query: 782  GGLLKYVHGGEYHAYNPDVVGTLQKAVKSGEIMDYREFAQQVNQRPVAMLRDLLRLKTSD 841
            GGLLK+VHGGEYHAYNPDVV TLQ AV+ G+   ++E+   V+ RPV+M+RDL ++KT D
Sbjct: 780  GGLLKFVHGGEYHAYNPDVVSTLQAAVQQGDYAKFKEYTALVDNRPVSMIRDLFKVKTLD 839

Query: 842  KPLPLEHIEPASDLYKRFDSAAMSIGALSPEAHEALATAMNRLGGYSNSGEGGEDPRRFG 901
             PL +  IEP   + KRFDSA +S+GALSPEAHEALA AMNRLG  SNSGEGGEDP R+G
Sbjct: 840  TPLTISEIEPLESILKRFDSAGISLGALSPEAHEALAEAMNRLGARSNSGEGGEDPARYG 899

Query: 902  TERNSRIKQVASGRFGVTPHYLTNADVLQIKVAQGAKPGEGGQLPGHKVTAEIAKLRYSV 961
            T ++S+IKQVA+GRFGVTP YL NA+VLQIKVAQGAKPGEGGQLPG KV   IAKLRY+V
Sbjct: 900  TIKSSKIKQVATGRFGVTPEYLVNAEVLQIKVAQGAKPGEGGQLPGGKVNGLIAKLRYAV 959

Query: 962  PGVTLISPPPHHDIYSIEDLAQLIFDLKQINPKALVSVKLVSEPGVGTIATGVAKAYADL 1021
            PGVTLISPPPHHDIYSIEDL+QLIFDLKQ+NP+ALVSVKLV+E GVGTIA GVAKAYADL
Sbjct: 960  PGVTLISPPPHHDIYSIEDLSQLIFDLKQVNPQALVSVKLVAEAGVGTIAAGVAKAYADL 1019

Query: 1022 ITISGYDGGTAASPLTSVKYAGSPWELGLAETQQALVANGLRHKIRLQVDGGLKTGLDVI 1081
            ITISGYDGGT ASPLTS+KYAG+PWELGLAET Q L  N LR K+R+Q DGGLKTGLDVI
Sbjct: 1020 ITISGYDGGTGASPLTSIKYAGAPWELGLAETHQTLRGNDLRGKVRVQTDGGLKTGLDVI 1079

Query: 1082 KGAILGAESFGFGTAPMVAMGCKFLRICHLNNCATGVATQDETLRKDYFKGLPEMVMNYF 1141
            K AILGAESFGFGTAPM+A+GCK+LRICHLNNCATGVATQ+E LRKD++ G  +MV+N+F
Sbjct: 1080 KAAILGAESFGFGTAPMIALGCKYLRICHLNNCATGVATQNEKLRKDHYIGTVDMVVNFF 1139

Query: 1142 KGLAEEVRGYLAELGVEKLTDLIGRTDLLEVVEGMTAKQSKLDLSDLLEAPVSPQNLPLY 1201
              +AEE R +LA+LGV  L +LIGRTDLL+++EG TAKQ+ LDL+ LL +   P + P +
Sbjct: 1140 TYVAEETREWLAKLGVRSLEELIGRTDLLDILEGQTAKQNHLDLTPLLGSDHIPADKPQF 1199

Query: 1202 C-TEPNTPFDKGALNQKIVEDALAAVENQQSLELYYNVINTDRSIGARLSGEIAKRYGNL 1260
            C  + N PFDKG L +K+VE A +++ +    E   ++ N DRSIGAR+SGEIA+++GN 
Sbjct: 1200 CQVDRNPPFDKGLLAEKMVEMASSSINDASGGEFALDICNCDRSIGARISGEIARKHGNQ 1259

Query: 1261 GVATSPIKVVLNGTAGQSFGVWNAGGLELYLTGDANDYVGKGMAGGKIVIRPHQGTAFVC 1320
            G+A +PI     GTAGQSFGVWNAGGL +YL GDANDYVGKGM GGK+VI P QG+ +  
Sbjct: 1260 GMAKAPITFRFKGTAGQSFGVWNAGGLHMYLEGDANDYVGKGMTGGKLVIVPPQGSVYKT 1319

Query: 1321 NEATIIGNTCLYGATGGKLFAAGKAGERFAVRNSGTIAVIEGAGDNACEYMTGGIVAILG 1380
             ++ IIGNTCLYGATGGKLFAAG AGERFAVRNSG   V+EG GD+ CEYMTGG VA+LG
Sbjct: 1320 QDSAIIGNTCLYGATGGKLFAAGTAGERFAVRNSGAHTVVEGTGDHCCEYMTGGFVAVLG 1379

Query: 1381 ATGVNFGAGMTGGFAYVLDENGDFQGRVNDESVEAVALTD--LYIHQEHLRGLIAEHLEE 1438
             TG NFG+GMTGGFAYVLD++  F  +VN E VE   ++   +  ++ HL+ ++ E++EE
Sbjct: 1380 KTGYNFGSGMTGGFAYVLDQDNTFVDKVNHELVEIQRISGEAMESYRNHLQHVLDEYVEE 1439

Query: 1439 TGSAHAERILANFDEWIPKFYLIKPQAADLRTLL 1472
            TGS     +  N D+++ +F+L+KP+AA+L++LL
Sbjct: 1440 TGSEWGRNLAENLDDYLRRFWLVKPKAANLKSLL 1473