Pairwise Alignments

Query, 1487 a.a., glutamate synthase large subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 1481 a.a., L-glutamate synthase(NADPH) alpha subunit from Pseudomonas putida KT2440

 Score = 1801 bits (4666), Expect = 0.0
 Identities = 897/1474 (60%), Positives = 1124/1474 (76%), Gaps = 9/1474 (0%)

Query: 3    LYDPSLEKDNCGFGLIAHMEGQASHKLVRTAISALDRMTHRGGIAADGKTGDGCGLLLQK 62
            LY P   KDNCGFGLIAHM G+ SH L++TA+ AL  MTHRGGI ADGKTGDGCGLL+QK
Sbjct: 5    LYHPEEFKDNCGFGLIAHMTGEPSHHLLQTAMQALTCMTHRGGINADGKTGDGCGLLMQK 64

Query: 63   PDSYLRLIAEEQHW-KLSKQYAIGMLFLSRDPHKAQLAQQIVNQELAKETLSVAGWRKVP 121
            PD +LR +A+E    +L KQYA+GM+F ++DP KA+ A+  +++E+    L + GWRKVP
Sbjct: 65   PDQFLRAMAQEHFAVELPKQYAVGMVFFNQDPVKAEAARANMDREILAAGLKLVGWRKVP 124

Query: 122  TNPKVLGPIALDSLPDIQQVFISAPAGWRERDVERRLYIARRRIEKQITDDRDFYICSLS 181
             +  VLG +AL+ LP I+QVFI    G  +++   +L+ ARRR       D D YICS S
Sbjct: 125  IDTSVLGRLALERLPQIEQVFIGGE-GLSDQEFAIKLFSARRRSSVANAHDADHYICSFS 183

Query: 182  TQVLVYKGLCMPADLPRFYLDLADLRMESAICLFHQRFSTNTQPRWPLAQPFRYLAHNGE 241
             + ++YKGL MP DL  FY DL D R+++AIC+FHQRFSTNT P+WPLAQPFR+LAHNGE
Sbjct: 184  HKTIIYKGLMMPRDLAAFYPDLGDERLQTAICVFHQRFSTNTLPKWPLAQPFRFLAHNGE 243

Query: 242  INTIEGNRQWARARAYKFASPLLPDLQSAAPFVNETGSDSSSLDNMLDLFLAGGMDIFRA 301
            INTI GNR WA AR  KFA+  +PDL+   P VN  GSDSSS+DNML+L + GG+D+FR 
Sbjct: 244  INTITGNRNWAVARRTKFANDQIPDLEELGPLVNRVGSDSSSMDNMLELMVTGGIDLFRG 303

Query: 302  MRMLVPPAWQNHPDMDPDLRAFYDFNSKHMEPWDGPAGIVLSDGRYAACNLDRNGLRPAR 361
            +RMLVPPAWQN   MD DLRAFY++NS HMEPWDGPAGIV+++GR+A C LDRNGLRPAR
Sbjct: 304  VRMLVPPAWQNVETMDADLRAFYEYNSMHMEPWDGPAGIVMTEGRHAVCLLDRNGLRPAR 363

Query: 362  YVITKDKLITLASEVGIWDYAPDEVSEKGRVGPGELLVIDTRKGKIWQSSEIDNDLKSRH 421
            +V T +  IT+ASE+G+W Y P+EV  KGRVGPG++L +DT  G+I  +  IDN LKSRH
Sbjct: 364  WVTTTNGYITIASEIGVWGYQPEEVLAKGRVGPGQILAVDTETGQILDTDAIDNRLKSRH 423

Query: 422  PYREWMENNVHKLTPFSQLPDDKVGERSFDADLLKTYQKQFAMSNEEIDQILRVLGDMAQ 481
            PY+ W+  +  ++   + L DD+ G  S+DAD LK Y K F ++ EE DQ+LR LG+  Q
Sbjct: 424  PYKRWLRQHATRIQ--ATLTDDQ-GVASYDADQLKQYMKMFQVTFEERDQVLRPLGEQGQ 480

Query: 482  EAVGSMGDDTPMAVLSSKERLISDYFRQKFAQVTNPPIDPLREKHVMSLATSIGQEMNVF 541
            EAVGSMGDDTPMAVLS + R   D+FRQ+FAQVTNPPIDPLRE  VMSL   +G E N+F
Sbjct: 481  EAVGSMGDDTPMAVLSQRVRSPYDFFRQQFAQVTNPPIDPLREAIVMSLEICLGAERNIF 540

Query: 542  CETDGHAHRVTFDSPILLYSDMQQLLTLSDQHYRNTILDINFDPQEKNLKQAVLDLCDKA 601
             E+  HA RV   SP++  +  + L+ L  + +   ++D+N++ Q   L+ A+ ++ D+A
Sbjct: 541  QESPEHASRVILSSPVISPAKWRSLMNLEREGFDRQLIDLNYE-QSVGLEAAIRNIADQA 599

Query: 602  EQVVREGTVLVVLSDRALTADRLPIPAAMAVGAVQARLVEANLRCDANIIIETGAARDPH 661
            E+ VR G   +VLSDR +   +LP+ A++AVGAV  RL E  LRCD+NI++ET  ARDPH
Sbjct: 600  EEAVRGGKTQLVLSDRYIAPGKLPVHASLAVGAVHHRLTEQGLRCDSNILVETATARDPH 659

Query: 662  HFAVLIGFGATAVYPYLAYETLGKMIDDGALQKSYREVMQNYQYGINKGLYKIMSKMGIS 721
            HFAVL+GFGA+AVYPYLAYE L  +I  G +     EV + Y+ GI+KGL KI+SKMGIS
Sbjct: 660  HFAVLLGFGASAVYPYLAYEVLADLIRTGEVLGDLDEVFKYYRKGISKGLLKILSKMGIS 719

Query: 722  TVASYRCSQLFEAVGLHRDVVDLCFKGVTTRIQGANFDDFEQDLFNLSRKAWAKRKPLEH 781
            T+ASYR +QLFEA+GL  +VV L FKGV++RI+GA F+D E D   L+ +AW+ RKP++ 
Sbjct: 720  TIASYRGAQLFEAIGLAEEVVGLSFKGVSSRIKGARFEDLENDQKLLAAEAWSARKPIQQ 779

Query: 782  GGLLKYVHGGEYHAYNPDVVGTLQKAVKSGEIMDYREFAQQVNQRPVAMLRDLLRLKTSD 841
            GGLLK+VHGGEYHAYNPDVV TLQ AV+ G+   ++E+   V+QRPV+M+RDLL++K +D
Sbjct: 780  GGLLKFVHGGEYHAYNPDVVNTLQAAVQQGDYAKFKEYTTLVDQRPVSMIRDLLKVKVAD 839

Query: 842  KPLPLEHIEPASDLYKRFDSAAMSIGALSPEAHEALATAMNRLGGYSNSGEGGEDPRRFG 901
            +PL LE +EP   + KRFDSA +S+GALSPEAHEALA AMNRLG  SNSGEGGEDP R+G
Sbjct: 840  QPLALEQVEPLEAILKRFDSAGISLGALSPEAHEALAEAMNRLGARSNSGEGGEDPSRYG 899

Query: 902  TERNSRIKQVASGRFGVTPHYLTNADVLQIKVAQGAKPGEGGQLPGHKVTAEIAKLRYSV 961
            T ++S+IKQVA+GRFGVTP YL NA+VLQIKVAQGAKPGEGGQLPG KV   IAKLRY+V
Sbjct: 900  TIKSSKIKQVATGRFGVTPEYLVNAEVLQIKVAQGAKPGEGGQLPGGKVNGLIAKLRYAV 959

Query: 962  PGVTLISPPPHHDIYSIEDLAQLIFDLKQINPKALVSVKLVSEPGVGTIATGVAKAYADL 1021
            PGVTLISPPPHHDIYSIEDLAQLI+DLKQ+NP+ALVSVKLV+E GVGTIA GVAKAYADL
Sbjct: 960  PGVTLISPPPHHDIYSIEDLAQLIYDLKQVNPQALVSVKLVAEAGVGTIAAGVAKAYADL 1019

Query: 1022 ITISGYDGGTAASPLTSVKYAGSPWELGLAETQQALVANGLRHKIRLQVDGGLKTGLDVI 1081
            ITISGYDGGT ASPLTS+KYAG+PWELGLAET Q L  N LR K+R+Q DGGLKTGLDVI
Sbjct: 1020 ITISGYDGGTGASPLTSIKYAGAPWELGLAETHQTLRGNDLRGKVRVQTDGGLKTGLDVI 1079

Query: 1082 KGAILGAESFGFGTAPMVAMGCKFLRICHLNNCATGVATQDETLRKDYFKGLPEMVMNYF 1141
            K AILGAESFGFGTAPM+A+GCK+LRICHLNNCATGVATQ++ LRKD++ G  +MV+N+F
Sbjct: 1080 KAAILGAESFGFGTAPMIALGCKYLRICHLNNCATGVATQNDKLRKDHYIGTVDMVINFF 1139

Query: 1142 KGLAEEVRGYLAELGVEKLTDLIGRTDLLEVVEGMTAKQSKLDLSDLLEAPVSPQNLPLY 1201
              +AEE R +LA+LGV  L +LIGRTDLLEV+ G T +Q  LDLS LL +   P + P +
Sbjct: 1140 TFVAEETREWLAKLGVRSLGELIGRTDLLEVLPGDTERQQYLDLSPLLGSSHIPADKPQF 1199

Query: 1202 C-TEPNTPFDKGALNQKIVEDALAAVENQQSLELYYNVINTDRSIGARLSGEIAKRYGNL 1260
            C  + N PFD G L +K+V+ A+ A+ +Q   E   ++ N DRSIGAR+SGEIA+ +GN 
Sbjct: 1200 CEVDKNPPFDLGELAEKMVDMAMPAIRDQAGGEFSLDICNCDRSIGARVSGEIARLHGNQ 1259

Query: 1261 GVATSPIKVVLNGTAGQSFGVWNAGGLELYLTGDANDYVGKGMAGGKIVIRPHQGTAFVC 1320
            G+A +PI     GTAGQSFGVWNAGGL L+L GDANDYVGKGM GGK+ I P  G+ F  
Sbjct: 1260 GMAAAPITFRFKGTAGQSFGVWNAGGLNLHLEGDANDYVGKGMTGGKVTIVPPAGSPFET 1319

Query: 1321 NEATIIGNTCLYGATGGKLFAAGKAGERFAVRNSGTIAVIEGAGDNACEYMTGGIVAILG 1380
              + I+GNTCLYGATGGKLFAAG AGERFAVRNSG  AV+EG GD+ CEYMTGG V +LG
Sbjct: 1320 QHSAIVGNTCLYGATGGKLFAAGTAGERFAVRNSGAHAVVEGTGDHCCEYMTGGFVCVLG 1379

Query: 1381 ATGVNFGAGMTGGFAYVLDENGDFQGRVNDESVEAVALTD--LYIHQEHLRGLIAEHLEE 1438
             TG NFG+GMTGGFAYVLD +  F  ++N E VE   ++   +  ++ HL  ++AE+++E
Sbjct: 1380 KTGYNFGSGMTGGFAYVLDMDNSFVDKLNHELVEIQRISGEAMEAYRSHLARVLAEYVDE 1439

Query: 1439 TGSAHAERILANFDEWIPKFYLIKPQAADLRTLL 1472
            TGS     +  N D+++ +F+L+KP+AA+L+ LL
Sbjct: 1440 TGSEWGRELSENLDDYVRRFWLVKPKAANLKQLL 1473