Pairwise Alignments

Query, 316 a.a., TIGR01212 family radical SAM protein from Vibrio cholerae E7946 ATCC 55056

Subject, 325 a.a., radical SAM protein, TIGR01212 family from Bacteroides ovatus ATCC 8483

 Score =  189 bits (480), Expect = 8e-53
 Identities = 107/302 (35%), Positives = 172/302 (56%), Gaps = 8/302 (2%)

Query: 5   MHLHQLVNTIGQDLQRRYGEKVHKLTLHGGFSCPNRDGTIGRGGCTFCNVASF-ADENTQ 63
           M    L N     L++ +  KV K++L+ GF+CPNRDGT G GGCT+CN  +F  D    
Sbjct: 3   MSTQLLYNDFPTFLRKYFPYKVQKISLNAGFTCPNRDGTKGWGGCTYCNNQTFNPDYCRT 62

Query: 64  QQSIQAQLKDRAGEIKRA---KKYLAYFQAYTSTYAEVQVLKSMYEQALEEADIVGLCVG 120
           ++SI  QL++            KYLAYFQAYT+TYAE++ LK  YE+AL    +VGL +G
Sbjct: 63  EKSIAIQLEEGKCFFAHKYPEMKYLAYFQAYTNTYAELEGLKRKYEEALAVDGVVGLVIG 122

Query: 121 TRPDCVPDAVLKLLADYVQQGYEIWLELGLQTAHDQTLKRINRGHDFACYAEITAKARAL 180
           TRPDC+P+++L+ L D  +  + + +E G+++  D+TLKRINRGH +A   E   +  A 
Sbjct: 123 TRPDCMPESLLRYLEDLNKHTF-LMVEYGIESTCDETLKRINRGHTYADTVEAVCQTAAC 181

Query: 181 GIKVCTHLIVGLPGEERTENLTTLQQVLKVGTDGIKLHGLHIVEGSTMAKAW---RAGRL 237
           GI    H+I+GLPGE     +   + +  +    +K+H L ++ G+ MA  +    AG  
Sbjct: 182 GILTGGHIILGLPGETHDTMVAQAEILSDLPLATLKIHQLQLIRGTRMAHEYDVTPAGFH 241

Query: 238 TVLDQDQYVSIACEMIRSTPPEIVYHRVSSAARRPTLLAPLWCENRWWAMTAIGQRLEKE 297
              + ++Y+ +  + +    P++V  R  S + +  L+AP W    +  +  + +R+++ 
Sbjct: 242 LFNEVEEYIDLVIDYVEHLRPDMVVERFVSQSPKDLLIAPDWGLKNYEFVARLQKRMKER 301

Query: 298 GA 299
           GA
Sbjct: 302 GA 303