Pairwise Alignments

Query, 579 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 567 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score =  135 bits (340), Expect = 4e-36
 Identities = 79/234 (33%), Positives = 124/234 (52%), Gaps = 9/234 (3%)

Query: 346 GKSLRYIDRIERSDGEFIWFDVVKSPFRDPASGTNGVLIMA--RDVSERYLAAEQLEAAN 403
           G+S  ++ R+     +++W +      R+       +  +   RD  ER LA   L+ A+
Sbjct: 334 GRSAAFVCRVRARHDDWVWMEASIGTVRETTLDGADIAFVCSLRDARERVLAERALKRAH 393

Query: 404 QELERLSFLDSLTHVANRRRFDEQLHTLWHLHVREGKPLSIILCDVDYFKDYNDAYGHLM 463
           +EL  ++  D LT +ANRRRF+      WH   R+   L + + D+D+FK  ND +GHL+
Sbjct: 394 EELALIASSDPLTGLANRRRFETIFDQEWHRAERDRHGLCLAMVDIDHFKGVNDTFGHLV 453

Query: 464 GDETLKQIAIAFTQVANRHSDCVARYGGEEFGILLPNTPQSGAILVAERIHEKVRGLAIP 523
           GDE L+++A+             ARYGGEEF +LLPNT       +  RIH+ ++     
Sbjct: 454 GDECLRRVAMVIKANLPPSVGLAARYGGEEFVLLLPNTSAVQGQALCARIHDDLQ----R 509

Query: 524 HDHSKVA---DRITVSLGIVTLIPRPEDVPEQMVELADRALYQAKANGRNQTSI 574
              S VA   DR+TVS+G+       E     ++ +AD ALY+AK++GRN+T +
Sbjct: 510 EPWSAVAPGLDRVTVSIGLCIARAPQEASMAGLIRIADEALYRAKSSGRNRTEV 563