Pairwise Alignments

Query, 579 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 505 a.a., GGDEF domain protein from Variovorax sp. SCN45

 Score =  154 bits (389), Expect = 8e-42
 Identities = 87/178 (48%), Positives = 114/178 (64%), Gaps = 2/178 (1%)

Query: 395 AAEQLEAANQELERLSFLDSLTHVANRRRFDEQLHTLWHLHVREGKPLSIILCDVDYFKD 454
           A E L  AN+ LE L+  D LT +ANRR FD+ L        REG PLS++L D+DYFK 
Sbjct: 319 AREDLLQANRRLEVLATQDQLTGLANRRSFDDVLARECRRTAREGTPLSLLLLDLDYFKH 378

Query: 455 YNDAYGHLMGDETLKQIAIAFTQVANRHSDCVARYGGEEFGILLPNTPQSGAILVAERIH 514
           +ND YGH+ GD  L+ +A A  Q   R  D VARYGGEE  I+LPNT   GA+ VAE++ 
Sbjct: 379 FNDTYGHVAGDRCLRAVADALQQGVRRPGDLVARYGGEEVAIILPNTDLPGALSVAEQLL 438

Query: 515 EKVRGLAIPHDHSKVADRITVSLGIVTLIPRPEDVPEQ-MVELADRALYQAKANGRNQ 571
           E+VR L I H  S   +R+T+S+G  +L     +  EQ ++E ADRALY+AK +GRN+
Sbjct: 439 ERVRALGIAHAASP-HERVTLSIGAASLHGMQANRAEQRLIEAADRALYRAKESGRNR 495