Pairwise Alignments

Query, 579 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 598 a.a., GGDEF domain-containing protein from Magnetospirillum magneticum AMB-1

 Score =  147 bits (372), Expect = 9e-40
 Identities = 85/222 (38%), Positives = 126/222 (56%), Gaps = 17/222 (7%)

Query: 360 GEFIWFDVVKSPFRDPASGTNGVLIMARDVSERYLAAEQLEAANQELERLSFLDSLTHVA 419
           GE  WF  + +  R  ++G   V+I  +++S+R       + A   L  L+  D LT +A
Sbjct: 381 GEARWF--LMNVRRAESAGGVRVVIAHQNISQR-------KEAELRLRHLAMNDGLTGIA 431

Query: 420 NRRRFDEQLHTLWHLHVREGKPLSIILCDVDYFKDYNDAYGHLMGDETLKQIAIAFTQVA 479
           NRR FDE L   W    R G PLS+++ DVD+FK YND YGH  GDE LK +A      A
Sbjct: 432 NRRAFDETLGQEWRRASRAGTPLSLLMIDVDHFKAYNDHYGHQAGDECLKAVAATLAATA 491

Query: 480 NRHSDCVARYGGEEFGILLPNTPQSGAILVAERIHEKVRGLAIPHDHSKVADRITVSLGI 539
            R +D VARYGGEEFG++LP++  + A  +AE++   +  L +PH+ S+    +T+S+G+
Sbjct: 492 KRPADLVARYGGEEFGVILPSSTLADAQALAEKMRLAIARLELPHEASQTEKTVTISIGV 551

Query: 540 VTL--------IPRPEDVPEQMVELADRALYQAKANGRNQTS 573
             L        +PR     + ++  AD ALY+AK  GRN+ +
Sbjct: 552 SCLNLAESPGALPRNGLDTQILIAHADNALYRAKTTGRNRVT 593



 Score = 26.6 bits (57), Expect = 0.003
 Identities = 13/47 (27%), Positives = 25/47 (53%), Gaps = 2/47 (4%)

Query: 157 IARTALDSLSELIFIKSTEGHLIATNRAFDQFWQGRIEEGSATFKGI 203
           +ART LD+L + + +    G ++A N ++ +F +     G   F G+
Sbjct: 290 LARTTLDALPDHVCVIDESGTILAVNGSWREFHEA--NNGDLAFCGV 334