Pairwise Alignments

Query, 579 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 578 a.a., GGDEF domain-containing protein from Magnetospirillum magneticum AMB-1

 Score =  136 bits (342), Expect = 3e-36
 Identities = 93/321 (28%), Positives = 163/321 (50%), Gaps = 12/321 (3%)

Query: 254 MQRQLREEMEKRRDTEVALAQRDTILQNILESSPDSIGIFNENMVYQACNQPFVEALGIA 313
           +++Q+     +  +      +    ++++LE+ P+ +   +    Y   N  F E  G+ 
Sbjct: 269 LEQQVAARTRELDEERARAVEARAFVESLLEAVPNPLWWKDTRGRYLGYNGAFRELHGVG 328

Query: 314 EVSDLVGKRLQDVIPEHIYARLSDTDSQVLHQGKSLRYIDRIERSDGEFIWFDVVKSPFR 373
             +D +G+   +++     A  S  D+Q L +   +++   +E +    +   V K+ + 
Sbjct: 329 P-TDWIGRTTAEMVNPGFAAIASQADTQALAEAGRVQFEAHLEVAADRALDVVVNKTVWH 387

Query: 374 DPASGTNGVLIMARDVSERYLAAEQLEAANQELERLSFLDSLTHVANRRRFDEQLHTLWH 433
              +   GV+ +  D++ER    +++EA   EL RL+  D LT + NRR F E       
Sbjct: 388 GRDNRPEGVIGVMLDITER----KRMEA---ELRRLATTDVLTGIFNRRHFMEMARIEVD 440

Query: 434 LHVREGKPLSIILCDVDYFKDYNDAYGHLMGDETLKQIAIAFTQVANRHSDCVARYGGEE 493
              R G+PL  ++ D+D+FK  ND +GH +GD  +K +A   TQ+  RH D + R GGEE
Sbjct: 441 RARRHGRPLVALMLDIDHFKRINDTHGHPVGDVAIKALADVCTQII-RHEDVLGRMGGEE 499

Query: 494 FGILLPNTPQSGAILVAERIHEKVRGLAIPHDHSKVADRITVSLGIVTLIPRPEDVPEQM 553
           F I+L  T   GA+LVAER+ + V  + IP +   VA   T S+G+   +     + + +
Sbjct: 500 FAIVLTETDLDGALLVAERLRQAVAAIRIPAELGTVA--FTTSIGVAERLEGDATI-DTI 556

Query: 554 VELADRALYQAKANGRNQTSI 574
           +  AD ALY AK +GRN+ ++
Sbjct: 557 LSRADMALYSAKRSGRNKVAV 577