Pairwise Alignments

Query, 579 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 477 a.a., PAS domain S-box protein from Magnetospirillum magneticum AMB-1

 Score =  124 bits (312), Expect = 7e-33
 Identities = 95/315 (30%), Positives = 156/315 (49%), Gaps = 18/315 (5%)

Query: 264 KRRDTE--VALAQRDTILQNILESSPDSIGIFNENMVYQACNQPFVEALGIAEVSDLVGK 321
           +RR TE    L +     ++++E  P+ +   + +   +  N+ F E  G+ +  D  G+
Sbjct: 171 ERRVTERTCQLDEARRFAESLVELLPNPLWFTDPDGSLRLYNRAFREMFGV-DSGDWHGQ 229

Query: 322 RLQDVIPEHIYA--RLSDTDSQVLHQGKSLRYIDRIERSDGE---FIWFDVVKSPFRDPA 376
               V+P+ +    +++D   +V   G  L +   ++  DG+    +   +V+S  R  A
Sbjct: 230 PTHGVLPQPLAGLDQMADMSLKVGGPG-GLAFEASLDHQDGQRTLVVNKGLVRSDCRGTA 288

Query: 377 SGTNGVLIMARDVSERYLAAEQLEAANQELERLSFLDSLTHVANRRRFDEQLHTLWHLHV 436
               G + +  D++ER       +    +L  L+  D LT   NRR F            
Sbjct: 289 DEPMGTIGIVTDITER-------KHMESQLRHLATTDELTGCLNRRAFFVAAEQELERAS 341

Query: 437 REGKPLSIILCDVDYFKDYNDAYGHLMGDETLKQIAIAFTQVANRHSDCVARYGGEEFGI 496
           R G  +S+++ D+D+FK  ND +GH +GD+ LK  A A  +   R  D   R GGEEF  
Sbjct: 342 RYGNAVSVLMIDIDHFKQVNDRHGHAVGDKALKA-ATAAIRANLREIDSFGRLGGEEFAA 400

Query: 497 LLPNTPQSGAILVAERIHEKVRGLAIPHDHSKVADRITVSLGIVTLIPRPEDVPEQMVEL 556
           +LP T  +GA+LVAER+ + V  +A+P    +   R+T SLG+    P  E   +Q++  
Sbjct: 401 MLPETTLAGALLVAERLRQAVEAIALPLGDDQPPLRLTTSLGVAERQP-GEVAVDQVLAR 459

Query: 557 ADRALYQAKANGRNQ 571
           AD ALY+AKA GRN+
Sbjct: 460 ADTALYRAKAEGRNR 474