Pairwise Alignments

Query, 785 a.a., aerobic respiration two-component sensor histidine kinase ArcB from Vibrio cholerae E7946 ATCC 55056

Subject, 1215 a.a., histidine kinase from Pseudomonas simiae WCS417

 Score =  206 bits (525), Expect = 5e-57
 Identities = 169/622 (27%), Positives = 292/622 (46%), Gaps = 54/622 (8%)

Query: 134  ADLENEVYQREKTQVELAERTALLRSFIDASPDLIYYRNAKGEFSGCNRAMEELTGKRES 193
            A +  ++  R   +  L ++   +R+ ++ +P  IY R+  G    CN +  ++   +  
Sbjct: 564  AYMRRQIQHRRMAERALNDQFEFMRALVNETPHPIYVRDRNGLLQTCNDSYLQVFDVKRE 623

Query: 194  ELVGLTPWDV---YRKEIAQSIVETDQQVFNNNTAITYEQWLEYPDGRKSFFELRKVPFY 250
            +++G +   +      E +Q   +  + V   N  I       +  G+K       +P+ 
Sbjct: 624  DVIGKSALQISTALETEASQYHADYQRVVAQGNPLIVDRPL--HIRGKKLTIYHWILPYR 681

Query: 251  NKDGRHLGLVGFGRDITERKR-------HEESLEKASRDKTTFISTISHELRTPLNGIVG 303
            +  G   G++G   DI+ER++        +E  ++A+R K+TF++T+SHE+RTP+N ++G
Sbjct: 682  DSTGEVQGIIGGWIDISERRQLFDELRAAKERADEANRAKSTFLATMSHEIRTPMNAVIG 741

Query: 304  LSRMLLDTPLSGE-QRKHLQTINVSAVTLGNIFNDIIDMDKFDRRKLELFPAALNFEEFV 362
            +  + L     G   R  ++    SA  L  +  DI+D+ + +  +L L P  +N ++ +
Sbjct: 742  MLELTLKRADQGHLDRPAIEVAYHSAKDLLELIGDILDIARIESGRLSLSPERVNLKDVI 801

Query: 363  AEIEVLAALMAEQKGLRFDLERLTDLPSL-VEVDSTRLRQVLWNLLSNAMKFTKEGGVVM 421
              +  +   +A QK L   LE    L    V +D  R +QVL NL+SNA+KFT+ G V +
Sbjct: 802  ESVVRVFDGLARQKTLSLLLEFKPGLDDTDVLIDPLRFKQVLSNLVSNAIKFTERGEVKV 861

Query: 422  TVSAECD--AQHAEITIEVEDTGIGIPEAEQEKIFAMYYQVKSGKDNLHAVGTGIGLAVS 479
             V        Q  E+ + VEDTGIGI   +Q ++F  + Q      +L   G G+GL + 
Sbjct: 862  KVEVHATDLPQQVEMKLVVEDTGIGISREDQLRLFEPFSQA-DNSGHLARSGAGLGLVIC 920

Query: 480  RQLIKLMGGDISVNSEEGFGSTFTVTIRVPLLAEAPIEIEPQ----EPQTELNIFMVEDI 535
            R L  +MGG +S++S    G+   V++++  L       EP+     P   LN+ +V+D 
Sbjct: 921  RSLCAMMGGQLSLSSVPMVGTQVYVSLKMHSLQPVHAVEEPKPATPTPAPVLNVLVVDDH 980

Query: 536  ELNITVARSLLESMGHKVTVAMTGEEAIQGFNPTEYDLVFLDIQLPDMTGFDIAHYYRTH 595
              N  +    L  +GH+ T A  G    Q +    +DLV  D  +P M G++++   R +
Sbjct: 981  PANRLLMCQQLGYLGHQFTAAQHGAAGFQAWRQEHFDLVIADCNMPIMNGYELSRSIREY 1040

Query: 596  --YSSLPPLVAL--TANVL-KDKEEYRQKGMDAAISKPLSVAAVREVIAKMTQHHAGESV 650
                 LPP V L  TAN   ++K    + GM+  + KP+S+  +   +A++  H      
Sbjct: 1041 EQREQLPPCVILGFTANAQPEEKRRCAEAGMNDCLFKPISLTILERQLAQIGPHPT---- 1096

Query: 651  AKVKSNKEKELPDDLYQQLLDLEMLQSYVEIVGSQPVIDSVHLFEQ--SMPAYLAVLDSN 708
                              LLDL  L +   + G  P + S  L E+  S  A+       
Sbjct: 1097 ----------------STLLDLSSLDA---LTGGDPQL-SRRLLEELLSSSAHDRQEIIA 1136

Query: 709  MVAKDQ--EGIVSEAHKIKGAA 728
            +VA+    + I+ +AHKIKGAA
Sbjct: 1137 LVARQAPLQDIIEQAHKIKGAA 1158