Pairwise Alignments

Query, 785 a.a., aerobic respiration two-component sensor histidine kinase ArcB from Vibrio cholerae E7946 ATCC 55056

Subject, 1331 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  232 bits (591), Expect = 1e-64
 Identities = 153/517 (29%), Positives = 270/517 (52%), Gaps = 18/517 (3%)

Query: 136 LENEVYQREKTQVELAERTALLRSFIDASPDLIYYRNAKGEFSGCNRAMEELTGKRESEL 195
           L     Q+   + ++ E++ L +  +DA+P+ +Y  +A G+F   N    +L G   +E+
Sbjct: 453 LSQNAEQQRLAERKVLEQSQLNQEILDATPNPMYCLSADGKFLTVNAKFLDLMGLYNNEV 512

Query: 196 VGLTPWDVYRKEIAQSIVETDQQVFNNNTAITYEQWLEYPDGRKSFFELRKVPFYNKDGR 255
           +   P +++  E+A+      Q +    ++  YE  L    G +    + +  F ++  +
Sbjct: 513 IDKEPQEIFPAEVAERFAAAHQVLTQQQSSQNYEVSLVDYTGVQREMLVYEASFSDRADK 572

Query: 256 HLGLVGFGRDITERKRHEESLEKA-------SRDKTTFISTISHELRTPLNGIVGLSRML 308
             G+VG   D+TERK  E+ L KA       S+ K  F++ +SHE+RTP+N I+G++ + 
Sbjct: 573 VNGIVGILLDMTERKEMEDELRKAKEAADAMSQAKGDFLANMSHEIRTPMNAILGMAHLA 632

Query: 309 LDTPLSGEQRKHLQTINVSAVTLGNIFNDIIDMDKFDRRKLELFPAALNFEEFVAEIEVL 368
           L+TPL   QRK++  IN SA  L  I NDI+D  K +  KL +     N ++ +  +  +
Sbjct: 633 LNTPLDTTQRKYVTRINESAKNLLGIINDILDFSKMEAGKLNVERIDFNLDDVLDNVTAV 692

Query: 369 AALMAEQKGLRFDLERLTDLPSLVEVDSTRLRQVLWNLLSNAMKFTKEGGVVMTVS-AEC 427
            +L A++KG+ F ++    +P  +  D  RL QV+ NL  NA+KFT +G +V++   ++ 
Sbjct: 693 VSLKAQEKGIEFLMDIDPHIPLGLIGDPLRLGQVMVNLCGNAVKFTSQGEIVLSARVSQL 752

Query: 428 DAQHAEITIEVEDTGIGIPEAEQEKIFAMYYQVKSGKDNLHAVGTGIGLAVSRQLIKLMG 487
           + Q   +   V+DTGIGI + + + +F  + Q  +     +  GTG+GL++S+QL++LMG
Sbjct: 753 NEQQVTLRFAVKDTGIGIAQDKLDDLFDAFSQADNSITRQYG-GTGLGLSISKQLVELMG 811

Query: 488 GDISVNSEEGFGSTFTVTIRVPLLAEAPIEI-EPQEPQTELNIFMVEDIELNITVARSLL 546
           G I+V+SEEG GSTF  ++   L      +I +P     +  + +V+D +    +  SLL
Sbjct: 812 GQITVHSEEGKGSTFEFSVVCGLQDAKMRDISQPVHGLADKRVLVVDDNDSARHILDSLL 871

Query: 547 ESMGHKVTVAMTGEEAIQGFNPTEYDLVFLDIQLPDMTGFDIAHYYRT-----HYSSLPP 601
            +M   V     G EA+       +D++F+D  +P M G ++    +T     H  S   
Sbjct: 872 TAMRFNVVTVSNGFEALSEIQQKPFDMLFVDWNMPGMNGIELLTRVKTLGLRGHMKSF-L 930

Query: 602 LVALTANVLKDKEEYRQKGMDAAISKPLSVAAVREVI 638
           + A    +  D E    K +DA I KP++ + + + I
Sbjct: 931 VTAYGREINLDGE--NSKLVDALIVKPVNPSNLLDAI 965



 Score = 87.8 bits (216), Expect = 4e-21
 Identities = 66/226 (29%), Positives = 113/226 (50%), Gaps = 10/226 (4%)

Query: 528  NIFMVEDIELNITVARSLLESMGHKVTVAMTGEEAIQGFNPTEYDLVFLDIQLPDMTGFD 587
            ++ +VED E+N  VA  LL+  G  V VA  G+EA++     ++DLV +D+Q+P M G  
Sbjct: 993  SLLLVEDNEVNQEVALGLLQDTGLNVVVANHGQEALERLEHADFDLVLMDMQMPVMDGIT 1052

Query: 588  IAHYYRTH--YSSLPPLVALTANVLK-DKEEYRQKGMDAAISKPLSVAAVREVIAKMTQH 644
               + R +  + SL P+VA+TAN +  D E   Q GM+  +SKP+ V    +V+    Q 
Sbjct: 1053 ATEHIRANPRWHSL-PIVAMTANAMAIDIERCLQAGMNDHLSKPIEVDKFYQVLRHFLQV 1111

Query: 645  HAGESVAKVKSNKEKELPDDL-----YQQLLDLEMLQSYVEIVGSQP-VIDSVHLFEQSM 698
               +S +    NK       +       QL  +++ Q+   I G+Q    + +  F  S 
Sbjct: 1112 SDEQSFSSHSPNKPSASKPAMNALLDLPQLTGVDLEQAIFRIGGNQQRYFEILRHFIDSQ 1171

Query: 699  PAYLAVLDSNMVAKDQEGIVSEAHKIKGAAGSVGLKRIQKIAQKAQ 744
               L  +   + A+D       AH +KG+A ++GL+ + ++A + +
Sbjct: 1172 VDELNSVTGLIEAQDWSSATRVAHTLKGSAANLGLEALAQLAAEME 1217