Pairwise Alignments
Query, 785 a.a., aerobic respiration two-component sensor histidine kinase ArcB from Vibrio cholerae E7946 ATCC 55056
Subject, 1740 a.a., PAS domain S-box protein from Pontibacter actiniarum KMM 6156, DSM 19842
Score = 280 bits (715), Expect = 6e-79
Identities = 201/672 (29%), Positives = 340/672 (50%), Gaps = 38/672 (5%)
Query: 123 IKAEEAREEAMADLENEVYQREKTQVELAERTALLRSFIDASPDLIYYRNA--KGEFSGC 180
I E+ E ++ + ++ ++K+Q+ LAE R ++ D +YYR++ G
Sbjct: 1070 IYLEDGSFEEVSGIALDITDKKKSQLALAENEEKFRRIFESFQD-VYYRSSLEDGTLELI 1128
Query: 181 NRAMEELTGKRESELVGLTPWDVYRKEIAQSIVETDQQVFNNNTAITYEQWLEYPDGRKS 240
+ ++ +L G E E++G + Y Q+ + Q V +T E + DG
Sbjct: 1129 SPSITQLLGYEEHEVLGQSTLLFYTNPEDQTRIR--QLVAAEHTVRDIEVEMVCKDGTPK 1186
Query: 241 FFELRKVPFYNKDGRHLGLVGFGRDITERKRHE-------ESLEKASRDKTTFISTISHE 293
L YN+ G + + G RD++E KR + E E + KT F++ +SHE
Sbjct: 1187 TIVLDAKLVYNEHGVPVAMEGVARDVSELKRTQIALLTAKEEAENLLKVKTQFLANMSHE 1246
Query: 294 LRTPLNGIVGLSRMLLDTPLSGEQRKHLQTINVSAVTLGNIFNDIIDMDKFDRRKLELFP 353
LRTP+NGI+G+ +L EQ +++ T+ S+ L I NDI+D+ K KL L
Sbjct: 1247 LRTPMNGIIGMIDLLSQINTDPEQSEYIDTLRKSSDALLAILNDILDLSKIQAGKLVLHE 1306
Query: 354 AALNFEEFVAEIEVLAALMAEQKGLRFDLERLTDLPSLVEVDSTRLRQVLWNLLSNAMKF 413
+ ++ E + +I L A+QK L F ++P V D TRL QVL NL SNA+KF
Sbjct: 1307 SGVDLHETLDKIHSLFVNRAQQKDLTFTYAIDPNVPRHVVTDETRLLQVLSNLTSNAIKF 1366
Query: 414 TKEGGVVMTVSAE-CDAQHAEITIEVEDTGIGIPEAEQEKIFAMYYQVKSGKDNLHAVGT 472
T G V + V AE D +H + + V+D+GIGI QE +F + Q+ + GT
Sbjct: 1367 TNAGEVSIHVGAEQLDRKHFRLHVRVKDSGIGISPEGQELLFNDFTQLDNSSTKTFG-GT 1425
Query: 473 GIGLAVSRQLIKLMGGDISVNSEEGFGSTFTVTIRVPLLAEAPIEIEPQEPQTELN---- 528
G+GLA+SRQL L+GGDI V S G GS F I+V L + +E + Q +L
Sbjct: 1426 GLGLAISRQLTHLLGGDIGVESIPGDGSVFWFNIKVRLASTLEVEQQQLRQQQQLQEVES 1485
Query: 529 ------IFMVEDIELNITVARSLLESMGHKVTVAMTGEEAIQGFNPTEYDLVFLDIQLPD 582
+ +V+D ++N VA+ LE +G +A G EAI+ +Y+++F+DIQ+P+
Sbjct: 1486 LTYTPYVLLVDDNQINQKVAQKQLERLGCITEIASNGYEAIERATTKKYNIIFMDIQMPE 1545
Query: 583 MTGFDIAHYYRTHY-SSLPPLVALTANVLK-DKEEYRQKGMDAAISKPLSVAAVREVIAK 640
M G + + S+ PP+VA+TA +K D ++ +GMD +SKP+ + + +I+K
Sbjct: 1546 MDGVTATKHIKEQLGSACPPIVAMTAYSMKDDAAKFMGQGMDDYVSKPVKSSDLHAMISK 1605
Query: 641 ---MTQHHAGESVAKVKSNKEKELPD-DLYQQLLDLEMLQSYVEIVGSQPVIDSVHLFEQ 696
T H A E+ E+E PD + + ++DL +++ +I G FE+
Sbjct: 1606 WENTTWHAAPET--------EEEAPDTETGEPIIDLAVVEQLKQIGGEDFTKQLYTEFEE 1657
Query: 697 SMPAYLAVLDSNMVAKDQEGIVSEAHKIKGAAGSVGLKRIQKIAQKAQSPEAPAWWENIS 756
+A + + +GI+S H++KG ++G+ + ++A++ + E I
Sbjct: 1658 EAAELIAEAKKELSVQHYKGILSTLHQLKGTGFTLGINPLAELAKQLEHDIKNEHLEYID 1717
Query: 757 DWVEEIKNEYQS 768
+ +++ +Y++
Sbjct: 1718 ENFSKLQMQYEN 1729
Score = 39.3 bits (90), Expect = 2e-06
Identities = 32/139 (23%), Positives = 65/139 (46%), Gaps = 4/139 (2%)
Query: 142 QREKTQVELAERTALLRSFIDASPDLIYYR-NAKGEFSGCNRAMEELTGKRESELVGLTP 200
Q + + L E R+F+D +LIYY + KG + N + E E++G
Sbjct: 545 QARRREEVLRESMDQFRNFLD-KVNLIYYSLDKKGNIAFANNYFMKYVEYTEEEMIGQNF 603
Query: 201 WD--VYRKEIAQSIVETDQQVFNNNTAITYEQWLEYPDGRKSFFELRKVPFYNKDGRHLG 258
++ V + + AQ + + + + + + YE+ + G+ + YN++G G
Sbjct: 604 YELLVPKHDRAQRLQDFHKAMETKHLSSYYERDVVTKSGQLKTIRWNCMFEYNQEGEVTG 663
Query: 259 LVGFGRDITERKRHEESLE 277
L G+D+T+++ E+L+
Sbjct: 664 LTSVGKDMTDKRIAMEALK 682
Score = 30.8 bits (68), Expect = 7e-04
Identities = 31/138 (22%), Positives = 61/138 (44%), Gaps = 6/138 (4%)
Query: 142 QREKTQVELAERTALLRSFIDASPDLIYYRNAKGEFSGCNRAMEELTGKRES-ELVGLTP 200
+R++ + ++ + A L + ++ ++ N E + NR + R S +L TP
Sbjct: 963 ERKRNEEQINTQNARLNAIFESGTHHMWSLNRHYELTSFNRNFAQAFESRNSRQLEQFTP 1022
Query: 201 W--DVYRKEIAQSIVETDQQVFNNNTAITYEQWLEYPDGRKSFFELRKVPFYNKDGRHLG 258
D E + + E + +E L+YP+ S+ E+ P Y +DG
Sbjct: 1023 INDDSMVHESSYAFWEDKYKQAFAGQPQHFEIQLKYPE---SWREVYLNPIYLEDGSFEE 1079
Query: 259 LVGFGRDITERKRHEESL 276
+ G DIT++K+ + +L
Sbjct: 1080 VSGIALDITDKKKSQLAL 1097