Pairwise Alignments

Query, 785 a.a., aerobic respiration two-component sensor histidine kinase ArcB from Vibrio cholerae E7946 ATCC 55056

Subject, 890 a.a., hypothetical protein from Magnetospirillum magneticum AMB-1

 Score =  190 bits (483), Expect = 3e-52
 Identities = 127/379 (33%), Positives = 193/379 (50%), Gaps = 13/379 (3%)

Query: 270 KRHEESLEKASRDKTTFISTISHELRTPLNGIVGLSRMLLDTPLSGEQRKHLQTINVSAV 329
           ++ ++  E+A++ K  F++T+SHE+RTP+NG++G++ +LLDT L  EQR    TI  SA 
Sbjct: 243 RQAQQVAERANQAKAAFLATMSHEIRTPMNGVIGMTGLLLDTQLDPEQRHFATTIRDSAE 302

Query: 330 TLGNIFNDIIDMDKFDRRKLELFPAALNFEEFVAEIEVLAALMAEQKGLRFDLERLTDLP 389
           +L  + NDI+D  K +  KL+L          V  I  + A  A  KG+        DLP
Sbjct: 303 SLLTVINDILDFSKLEAGKLDLESTDFELVGLVESIVDILAPRAHAKGIEIASMVDPDLP 362

Query: 390 SLVEVDSTRLRQVLWNLLSNAMKFTKEGGVVMTVSAECDAQHA-EITIEVEDTGIGIPEA 448
           + V  D  RLRQ+L NL  NA+KFT  GG+ + V  E     A  +  +V DTGIGIP+ 
Sbjct: 363 AWVRGDPGRLRQILMNLAGNAIKFTSHGGISIEVRDETSPDGAGRLRFDVRDTGIGIPQD 422

Query: 449 EQEKIFAMYYQVKSGKDNLHAVGTGIGLAVSRQLIKLMGGDISVNSEEGFGSTFTVTIRV 508
              ++F+M+ QV +     +  GTG+GLA+S++L ++MGG I V S  G GS F  ++  
Sbjct: 423 AIGRLFSMFMQVDASTARRYG-GTGLGLAISKRLTEMMGGTIGVESTPGAGSLFWFSLPF 481

Query: 509 PLLAEAPIEIEPQEPQ-TELNIFMVEDIELNITVARSLLESMGHKVTVAMTGEEAI---- 563
            ++  AP    PQ P      I +V+D  +N  V    L   G  V      E A+    
Sbjct: 482 QMVETAP----PQRPDLAGRRILVVDDSPINRDVLERQLRGFGVIVASCADAESALAELG 537

Query: 564 -QGFNPTEYDLVFLDIQLPDMTGFDIAHYYRTHYSSLPPLVALTANVLKDKEEYRQKGMD 622
                 T ++   +D ++P +TG D+    R     L P+  + A+      E      D
Sbjct: 538 RAAATGTPWEAAIIDARMPGVTGSDLIGRIRAE-PVLAPMGLIIASSQGLSPEDGSPKAD 596

Query: 623 AAISKPLSVAAVREVIAKM 641
           A I KPL    +  V+A++
Sbjct: 597 AFIHKPLRRQTILAVLARV 615



 Score =  108 bits (271), Expect = 1e-27
 Identities = 78/243 (32%), Positives = 122/243 (50%), Gaps = 16/243 (6%)

Query: 509 PLLAEAPIEIEPQ---EPQTELNIFMVEDIELNITVARSLLESMGHKVTVAMTGEEAIQG 565
           P L ++P E EP+    P   L I + ED  +N  VA  LL  +GH V VA  G EA++ 
Sbjct: 622 PGLQDSP-ESEPEAIPRPARRLRILVAEDNPVNQQVAVGLLRKLGHSVDVAADGAEAVEA 680

Query: 566 FNPTEYDLVFLDIQLPDMTGFDIAHYYR--THYSSLPPLVALTANVLK-DKEEYRQKGMD 622
                YDLV +D+Q+P+M G       R  T  +   P+VA+TAN ++ D       GMD
Sbjct: 681 VRSRPYDLVLMDVQMPEMDGLQATAAIRALTGGAERVPIVAMTANAMRGDDRMCLDAGMD 740

Query: 623 AAISKPLSVAAVREVIAKMTQHHAGESVAKVKSNKEKELPDDLYQQLLDLEMLQSYVEIV 682
             ISKP+    + EV+A+    +A E  A      E   P       +++++L    E +
Sbjct: 741 RYISKPIDRRKLMEVLAQ----YAAEPPAAKPPQAENPAP-----SAVEIDVLDLLCEDL 791

Query: 683 GSQPVIDSVHLFEQSMPAYLAVLDSNMVAKDQEGIVSEAHKIKGAAGSVGLKRIQKIAQK 742
           G + V++ +  F +   +  A   + +  +D E +  EAH IKGAA S+GL  I++ A+ 
Sbjct: 792 GVETVVEILAKFFEDATSREAECAAALAREDHERVRREAHAIKGAAASLGLTDIRRTAEA 851

Query: 743 AQS 745
            ++
Sbjct: 852 MEA 854