Pairwise Alignments

Query, 785 a.a., aerobic respiration two-component sensor histidine kinase ArcB from Vibrio cholerae E7946 ATCC 55056

Subject, 631 a.a., signal transduction histidine kinase from Magnetospirillum magneticum AMB-1

 Score =  213 bits (542), Expect = 3e-59
 Identities = 158/512 (30%), Positives = 254/512 (49%), Gaps = 34/512 (6%)

Query: 268 ERKRHEE-------SLEKASRDKTTFISTISHELRTPLNGIVGLSRMLLDTPLSGEQRKH 320
           ERK  EE       S E+A+R K+ F++ + HE+RTPLNG++G++R+LL+T L   Q+  
Sbjct: 128 ERKMGEEVLREARDSAEQAARAKSVFLAMMGHEIRTPLNGVLGMARLLLETDLDPRQKSF 187

Query: 321 LQTINVSAVTLGNIFNDIIDMDKFDRRKLELFPAALNFEEFVAEIEVLAALMAEQKGLRF 380
            +T+  S   L  + NDI+D  + D   + L     +  + V E+ ++ A  A +K L  
Sbjct: 188 AETLVSSGELLLGLVNDILDFSRLDAEGMTLAVEPFDVLDTVEEVRLVLASRAAEKDLAL 247

Query: 381 DLERLTDLPSLVEVDSTRLRQVLWNLLSNAMKFTKEGGVVMTVSAECDAQHAEITIEVED 440
                  +  +V  D  RLRQ+L+NL+ NA+KFT  GGV + V      Q   +   V+D
Sbjct: 248 SCRFGAGVRRVVSGDRLRLRQILFNLVGNAIKFTDRGGVEIGVEPLAVEQGQILRFSVKD 307

Query: 441 TGIGIPEAEQEKIFAMYYQVKSGKDNLHAVGTGIGLAVSRQLIKLMGGDISVNSEEGFGS 500
           +GIGI      ++F  ++Q  SG       G G+GLA+ ++L  LMGG I  +S    GS
Sbjct: 308 SGIGIAPEIGAQLFTEFWQGDSGAAR-RFDGAGLGLAICKRLTDLMGGVIGYDSLPDRGS 366

Query: 501 TFTVTIRVPLLAEAPIEIEPQEPQTELNIFMVEDIELNITVARSLLESMGHKVTVAMTGE 560
           TF V + +P  AE+P+  +    +    + +V+D E+N  VA  LL+  GH V  A  G 
Sbjct: 367 TFRVDLPLP-PAESPLAEQSGGSERPCRVLLVDDNEVNREVAAGLLQRRGHHVVCACDGH 425

Query: 561 EAIQGFNPTEYDLVFLDIQLPDMTGFDIAHYYRT--HYSSLPPLVALTANVLK-DKEEYR 617
           E ++      +DLV LD+++P M G D A   R     ++  PL  LTAN +K D+  +R
Sbjct: 426 EGVEAAARGGFDLVLLDMRMPGMDGIDTARAIRALPGEAAKVPLYLLTANPVKEDEARWR 485

Query: 618 QKGMDAAISKPLSVAAVREVIAKMTQHHAGESVAKVKSNKEKELPDDLYQQLLDLEMLQS 677
           + G+   ++KP     +  ++       +G   A   S ++ +        L+++  L S
Sbjct: 486 EAGILGCLAKPFRFDHIGHLL-------SGSDAAPRASAQDTD--------LVEVAGLLS 530

Query: 678 YVEIVGSQPVIDSVHLFEQSMPAYLAVLDSNMVAKDQEGIVSEAHKIKGAAGSVGLK--- 734
            +  +G   ++  V LF  S  A LA L  +  A         AH++  AA S+ L    
Sbjct: 531 DMGDLGRDRMVGLVELFRTSSAADLAALADHAQAGRLAEAGQLAHRMASAASSLHLSPLA 590

Query: 735 ---RIQKIAQKAQSPEAPAWWENISD-WVEEI 762
              R  + A +++ PE  A  E ++D W   +
Sbjct: 591 AKCRAVEDAARSEDPETMARAEELADLWARSL 622



 Score = 28.5 bits (62), Expect = 0.001
 Identities = 31/147 (21%), Positives = 68/147 (46%), Gaps = 19/147 (12%)

Query: 527 LNIFMVEDIELNITVARSLL---ESMGHKVTVAMTGEEAIQGFN--PTEYDLVFLDIQLP 581
           + + ++ED   +  +   +L   ++   +VTV     +A++  +  P  +D+V  D+ +P
Sbjct: 6   IRVLLLEDDPADAKLVGQMLRRVKTTPFEVTVVGRLAQAVERLSEGPQSFDVVLADLGVP 65

Query: 582 DMTGFDIAHYYRTHYSSLPPLVALTAN---------VLKDKEEYRQKGMDAA--ISKPLS 630
           D +G    +   T  +   P+V LT N         + +  ++Y  KG+  A  +S+ + 
Sbjct: 66  DSSGIGTLNAL-TRVAPRLPVVVLTGNDDDAVALEALKRGAQDYLVKGLGDAFILSRVVR 124

Query: 631 VAAVREVIAKMTQ--HHAGESVAKVKS 655
            A  R++  ++ +    + E  A+ KS
Sbjct: 125 YAIERKMGEEVLREARDSAEQAARAKS 151