Pairwise Alignments

Query, 785 a.a., aerobic respiration two-component sensor histidine kinase ArcB from Vibrio cholerae E7946 ATCC 55056

Subject, 956 a.a., PAS domain S-box from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  210 bits (535), Expect = 3e-58
 Identities = 153/594 (25%), Positives = 297/594 (50%), Gaps = 37/594 (6%)

Query: 75  VVVDQLEESRQRLSKLVSKLKDMRSRDQELNQKLQQNIVKLNQEIEERIKAEEAREEAMA 134
           VV   L++ +++  K + +  D  S +    +K     +   +  E     +E +  +  
Sbjct: 369 VVEKDLQKLQEKAKKALDEKWDYLSFEVSFLKK--DGAIIRTKNFERLFYDQEGKFVSSV 426

Query: 135 DLENEVYQREKTQVELAERTALLRSFIDASPDLIYYRNAKGEFSGCNRAMEELTGKRESE 194
            +  ++ ++   + EL +    LRS +++ PD+I+  + +G +        ++       
Sbjct: 427 GICTDITEKYLAERELIKSENRLRSVLNSLPDIIFIYDNQGVYLDYYVQESDMLISPPEL 486

Query: 195 LVGLTPWDVYRKEIAQSIVETDQQVFNNNTAITYEQWLEYPDGRKSFFELRKVPFYNKDG 254
            +G    D+      + +     +        T +  L+ P G+K F E+R   F+  D 
Sbjct: 487 SLGKHIRDIIPPPYGEKMESALLRAAKTGKVQTEQMTLDLPSGKK-FLEIR---FFKLDE 542

Query: 255 RHLGLVGFGRDITERKRHEESL-------EKASRDKTTFISTISHELRTPLNGIVGLSRM 307
             +  +  GRD+TE+K  E+ L       E A+R K+ F++++SHE+RTP+NG++G+  +
Sbjct: 543 ERM--ISVGRDVTEQKLWEKGLKEAKEVAEGANRAKSEFLASMSHEIRTPMNGLLGMIGL 600

Query: 308 LLDTPLSGEQRKHLQTINVSAVTLGNIFNDIIDMDKFDRRKLELFPAALNFEEFVAEIEV 367
           L  T +  EQ+  ++ I  S  +L  I  DI+D  K +  KLEL  ++  F E + ++  
Sbjct: 601 LEHTKMDDEQQSIVKVIKDSGESLLVIIKDILDYSKIEEGKLELELSSSKFREELNKVIN 660

Query: 368 LAALMAEQKGLRFDLERLTDLPSLVEVDSTRLRQVLWNLLSNAMKFTKEGG-VVMTVSAE 426
           + + M   K L  +L+    +P  + +D+ +L Q+L+N++ NA+KFT +GG V + VS E
Sbjct: 661 IFSGMVVGKELSLNLDIAPTIPQWLILDNEKLSQILFNIIGNAVKFTPKGGDVSIKVSGE 720

Query: 427 -CDAQHAEITIEVEDTGIGIPEAEQEKIFAMYYQVKSGKDNLHAVGTGIGLAVSRQLIKL 485
               ++  +   V+DTG+GIP+++ +++   + Q   G       G+G+GLA++ +LI+L
Sbjct: 721 PILDKNFMLYFNVKDTGVGIPKSKIDQLINPFTQTGRGTAE-EKSGSGLGLAIANKLIEL 779

Query: 486 MGGDISVNSEEGFGSTFTVTIRVPL--------------LAEAPIEIEPQEPQTELNIFM 531
           MGG + + SE G GS F+ T+   +               A+   ++     +    I +
Sbjct: 780 MGGSLQIESEVGKGSEFSFTVFARISDSEEKVGKDDYEKYAKEEYKLSHISDKFPKEILL 839

Query: 532 VEDIELNITVARSLLESMGHKVTVAMTGEEAIQGFNPTEYDLVFLDIQLPDMTGFDIA-H 590
            ED ++N+   + L++ +G+ V    TGEEA++      YD++F+D Q+P M G + +  
Sbjct: 840 AEDNDINLKFMKLLMKQLGYSVDTVSTGEEAVKAVQKKRYDMIFMDYQMPVMDGLEASRE 899

Query: 591 YYRTHYSSLPPLVALTANVLK-DKEEYRQKGMDAAISKPLSVAAVREVIAKMTQ 643
             +        ++ L+ANV K D E   + GMD  ++KP+    +++V+ K+ +
Sbjct: 900 IKKMKEGKYIRIIGLSANVFKEDIERAYEAGMDDYLTKPIK---IQDVVMKIKE 950