Pairwise Alignments

Query, 785 a.a., aerobic respiration two-component sensor histidine kinase ArcB from Vibrio cholerae E7946 ATCC 55056

Subject, 778 a.a., aerobic respiration control sensor histidine protein kinase, cognate to two-component response regulators ArcA and RssB from Escherichia coli BL21

 Score =  895 bits (2313), Expect = 0.0
 Identities = 460/786 (58%), Positives = 601/786 (76%), Gaps = 19/786 (2%)

Query: 1   MKPMKNLAQYYVDLLVKLGILRFSILLALALVALAVVVQVGITLILNGFVDDIDIIRSVF 60
           MK ++ LAQYYVDL++KLG++RFS+LLALALV LA+VVQ+ +T++L+G V+ ID+IRS+F
Sbjct: 1   MKQIRLLAQYYVDLMMKLGLVRFSMLLALALVVLAIVVQMAVTMVLHGQVESIDVIRSIF 60

Query: 61  FGLLITPWAVYFLSVVVDQLEESRQRLSKLVSKLKDMRSRDQELNQKLQQNIVKLNQEIE 120
           FGLLITPWAVYFLSVVV+QLEESRQRLS+LV KL++MR RD  LN +L+ NI +LNQEI 
Sbjct: 61  FGLLITPWAVYFLSVVVEQLEESRQRLSRLVQKLEEMRERDLSLNVQLKDNIAQLNQEIA 120

Query: 121 ERIKAEEAREEAMADLENEVYQREKTQVELAERTALLRSFIDASPDLIYYRNAKGEFSGC 180
            R KAE   +E    L+ E+ +RE+TQ++L ++++ LRSF+DASPDL++YRN   EFSGC
Sbjct: 121 VREKAEAELQETFGQLKIEIKEREETQIQLEQQSSFLRSFLDASPDLVFYRNEDKEFSGC 180

Query: 181 NRAMEELTGKRESELVGLTPWDVYRKEIAQSIVETDQQVFNNNTAITYEQWLEYPDGRKS 240
           NRAME LTGK E +LV L P DVY  E A  ++ETD++VF +N ++TYEQWL+YPDGRK+
Sbjct: 181 NRAMELLTGKSEKQLVHLKPADVYSPEAAAKVIETDEKVFRHNVSLTYEQWLDYPDGRKA 240

Query: 241 FFELRKVPFYNKDGRHLGLVGFGRDITERKRHEESLEKASRDKTTFISTISHELRTPLNG 300
            FE+RKVP+Y++ G+  GL+GFGRDITERKR++++LE+ASRDKTTFISTISHELRTPLNG
Sbjct: 241 CFEIRKVPYYDRVGKRHGLMGFGRDITERKRYQDALERASRDKTTFISTISHELRTPLNG 300

Query: 301 IVGLSRMLLDTPLSGEQRKHLQTINVSAVTLGNIFNDIIDMDKFDRRKLELFPAALNFEE 360
           IVGLSR+LLDT L+ EQ K+L+TI+VSAVTLGNIFNDIIDMDK +RRK++L    ++F  
Sbjct: 301 IVGLSRILLDTELTAEQEKYLKTIHVSAVTLGNIFNDIIDMDKMERRKVQLDNQPVDFTS 360

Query: 361 FVAEIEVLAALMAEQKGLRFDLERLTDLPSLVEVDSTRLRQVLWNLLSNAMKFTKEGGVV 420
           F+A++E L+AL A+QKGLRF+LE    LP  V  D TRLRQ+LWNL+SNA+KFT++G V 
Sbjct: 361 FLADLENLSALQAQQKGLRFNLEPTLPLPHQVITDGTRLRQILWNLISNAVKFTQQGQVT 420

Query: 421 MTVS-AECDAQHAEITIEVEDTGIGIPEAEQEKIFAMYYQVKSGKDNLHAVGTGIGLAVS 479
           + V   E D  H     EVED+GIGIP+ E +KIFAMYYQVK       A GTGIGLAVS
Sbjct: 421 VRVRYDEGDMLH----FEVEDSGIGIPQDELDKIFAMYYQVKDSHGGKPATGTGIGLAVS 476

Query: 480 RQLIKLMGGDISVNSEEGFGSTFTVTIRVPLLAEAPIEI--EPQEPQTELNIFMVEDIEL 537
           R+L K MGGDI+V SE+G GSTFT+TI  P +AE   +   E   P   LN+ +VEDIEL
Sbjct: 477 RRLAKNMGGDITVTSEQGKGSTFTLTIHAPSVAEEVDDAFDEDDMPLPALNVLLVEDIEL 536

Query: 538 NITVARSLLESMGHKVTVAMTGEEAIQGFNPTEYDLVFLDIQLPDMTGFDIAHYYRTHY- 596
           N+ VARS+LE +G+ V VAMTG+ A++ F P EYDLV LDIQLPDMTG DI+      Y 
Sbjct: 537 NVIVARSVLEKLGNSVDVAMTGKAALEMFKPGEYDLVLLDIQLPDMTGLDISRELTKRYP 596

Query: 597 -SSLPPLVALTANVLKDKEEYRQKGMDAAISKPLSVAAVREVIAKM--TQHHAGESVAKV 653
              LPPLVALTANVLKDK+EY   GMD  +SKPLSV A+  +I K   TQ     +V   
Sbjct: 597 REDLPPLVALTANVLKDKQEYLNAGMDDVLSKPLSVPALTAMIKKFWDTQDDEESTVTTE 656

Query: 654 KSNKEKELPDDLYQQLLDLEMLQSYVEIVGSQPVIDSVHLFEQSMPAYLAVLDSNMVAKD 713
           +++K         + LLD+ ML+ Y+E+VG + + D + +FE+ MP Y++VL+SN+ A+D
Sbjct: 657 ENSKS--------EALLDIPMLEQYLELVGPKLITDGLAVFEKMMPGYVSVLESNLTAQD 708

Query: 714 QEGIVSEAHKIKGAAGSVGLKRIQKIAQKAQSPEAPAWWENISDWVEEIKNEYQSDIALL 773
           ++GIV E HKIKGAAGSVGL+ +Q++ Q+ QSP+ PAW +N+ +W+EE+K E++ D+ +L
Sbjct: 709 KKGIVEEGHKIKGAAGSVGLRHLQQLGQQIQSPDLPAWEDNVGEWIEEMKEEWRHDVEVL 768

Query: 774 KRWLTQ 779
           K W+ +
Sbjct: 769 KAWVAK 774