Pairwise Alignments

Query, 785 a.a., aerobic respiration two-component sensor histidine kinase ArcB from Vibrio cholerae E7946 ATCC 55056

Subject, 1153 a.a., Sensor histidine kinase RcsC from Azospirillum sp. SherDot2

 Score =  255 bits (652), Expect = 8e-72
 Identities = 195/632 (30%), Positives = 308/632 (48%), Gaps = 40/632 (6%)

Query: 130  EEAMADLENEVYQREKTQVELAERTALLRSFIDASPDLIYYRNA-KGEFSGCNRAMEELT 188
            EE +     ++ +R + +  L    A L + ID  P ++Y  +   G     NRA E+  
Sbjct: 484  EEVLLSSVVDITRRREAEELLRRTQAFLDAVIDNVPSVLYVLDGDSGRVLLWNRAAEDCF 543

Query: 189  GKRESELVGLTPWDVYRKEIAQSIVETDQQVFNNNTAITYEQWLEYPDGRKSFFELRKVP 248
            G R +++   T  +V   E  +++   D     +  ++  E+ +   +G  + F L++ P
Sbjct: 544  GTRRADIEDRTLAEVLGPETGRALAGGDP---GSMRSLGVEELVLPRNGENTVFALQRHP 600

Query: 249  F-YNKDGRHLGLVGFGRDITERKRHEESL-------EKASRDKTTFISTISHELRTPLNG 300
            F ++ DGR   ++    DIT  +R  E L       E+A   KT F++T+SHE+RTPLNG
Sbjct: 601  FEWSGDGR-CRIICVANDITASRRAREELRQAKERAERADAAKTEFLATVSHEMRTPLNG 659

Query: 301  IVGLSRMLLDTPLSGEQRKHLQTINVSAVTLGNIFNDIIDMDKFDRRKLELFPAALNFEE 360
            I+GL R+LL   L   +R++  +I      L +  NDI+D+ K +  KL+L P       
Sbjct: 660  ILGLCRLLLTGQLHAGERRYAMSIMRCGHGLLDQVNDILDLRKIEDGKLDLDPTPCALLP 719

Query: 361  FVAEIEVLAALMAEQKGLRFDLERLTDLPSLVEVDSTRLRQVLWNLLSNAMKFTKEGGVV 420
             + E+      +A +KG+  DL+   ++P  V +D  RLRQ+L NL+ NA+KFT+ GGV 
Sbjct: 720  VLEEVVATVEGLANEKGIYLDLDIAPEVPDQVVIDRQRLRQILVNLVGNAVKFTERGGVD 779

Query: 421  MTVSAECDAQHA----EITIEVEDTGIGIPEAEQEKIFAMYYQVKSGKDNLHAVGTGIGL 476
            + V  E   + +     + + V DTGIG+P   +  IF    Q           G+G+GL
Sbjct: 780  LRVDIEPGPERSGTGEMLRLAVRDTGIGVPADRRAAIFEKLEQADPTIARRFG-GSGLGL 838

Query: 477  AVSRQLIKLMGGDISVNSEEGFGSTFTVTIRV-----PLLAEAPIEIEPQEPQTELNIFM 531
            A+ R L+  M G I V+S EG GS FTVTI +     P L   P  + P      L + +
Sbjct: 839  AIVRHLLDAMQGSIRVDSVEGLGSVFTVTIPLLRVDEPALPARPGRLLPISRVRSLALLL 898

Query: 532  VEDIELNITVARSLLESMGHKVTVAMTGEEAIQGFNPTEYDLVFLDIQLPDMTGFDIAHY 591
            VED  +N  VA  LL   GH++TVA TGE A++      +D + LDI+LPD+ G ++A  
Sbjct: 899  VEDDAINREVALGLLSDAGHRITVAETGESALELATRRHFDAILLDIRLPDIDGPEVARR 958

Query: 592  YRTHYS---SLPPLVALTANVL-KDKEEYRQKGMDAAISKPLSVAAVREVIAKMT----- 642
             R       +  P+VA+TANV   D+  Y   G+DA I KP+    +  +++        
Sbjct: 959  IRALEDADRAAVPIVAVTANVFAADRARYIASGIDAVIEKPIFPERLMHLLSNAVAPRDD 1018

Query: 643  -QHHAGESVAKVKSNKEKELPDDLYQQLLDLEMLQSYVEIVGSQPVIDSVHLFEQSMPAY 701
             +      V    S + + + DD+ +     E+L+ Y+  +G         L  +S    
Sbjct: 1019 DEEPGAGMVPAETSPRPRVVEDDVNE-----EILERYIRSLGPARFTTIRGLLLESAQEG 1073

Query: 702  LAVLDSNMVAKDQEGIVSEAHKIKGAAGSVGL 733
            L  L +     D+  I   AH++ GAA   GL
Sbjct: 1074 LPRLSAADTPDDE--IEDIAHRLAGAASHFGL 1103