Pairwise Alignments

Query, 785 a.a., aerobic respiration two-component sensor histidine kinase ArcB from Vibrio cholerae E7946 ATCC 55056

Subject, 1142 a.a., Sensor histidine kinase RcsC from Azospirillum sp. SherDot2

 Score =  231 bits (588), Expect = 2e-64
 Identities = 197/674 (29%), Positives = 307/674 (45%), Gaps = 89/674 (13%)

Query: 139  EVYQREKTQVELAERTALLRSFIDASPDLIYYRNAKGEFSGCNRAMEELTGKRESELVGL 198
            ++ +RE     LA   A  R+  +A    I   +  G     NRA E L G R +++VG 
Sbjct: 435  DITERELAANRLASSEARYRAMFEAVGQPIVTIDEHGTIDAFNRAAERLFGYRAADMVGG 494

Query: 199  TPWDVYRKEIAQSIVETDQQVFNNNTAITYEQWLEYPDGRKSFFELRKVPFYNKDGRHLG 258
                         ++ T     ++    TY +     D      E+R++    KDG    
Sbjct: 495  P---------MTRLMPTAMGAVHDGLLATYRE----SDASAPRSEIRELTGRRKDGSEFP 541

Query: 259  L---------------VGFGRDITERKRHEESL-------EKASRDKTTFISTISHELRT 296
            L                G  RD+T ++  E SL       ++A+R K  F++T+SHE+RT
Sbjct: 542  LEVTLAGWREGDRRYVTGALRDVTAQREIEASLRRAKEAADQANRAKGEFLATMSHEIRT 601

Query: 297  PLNGIVGLSRMLLDTPLSGEQRKHLQTINVSAVTLGNIFNDIIDMDKFDRRKLELFPAAL 356
            P+NG++G   ++    L+ EQR+ L   N S   L  I +DI+D+ K +  K E+ P   
Sbjct: 602  PMNGVLGALALVEGPNLNEEQRQLLDVANRSGNALLQIIDDILDLSKLEAGKAEVEPVDF 661

Query: 357  NFEEFVAEIEVLAALMAEQKGLRFDLERLTDLPSLVEVDSTRLRQVLWNLLSNAMKFTKE 416
                 + +   L    A  +GL    E  + +P  V  D  R+RQVL NL+ NA+KFT  
Sbjct: 662  ELRAVLGDSIDLLEPTACGRGLILTREVASAVPDRVRADLRRIRQVLVNLVGNALKFTNR 721

Query: 417  GGVVMTVSAECDAQHAE---------ITIEVEDTGIGIPEAEQEKIFAMYYQVKSGKDNL 467
            GGV + V+ E   + A          +  EV DTGIGIPE  Q+ +F  + Q  S     
Sbjct: 722  GGVSVRVALEGAGKGAAALAADGGFFLRFEVVDTGIGIPENVQQTLFRRFTQADSSTTRR 781

Query: 468  HAVGTGIGLAVSRQLIKLMGGDISVNSEEGFGSTFTVTIRVPLLAE--APIEIEPQEPQ- 524
               GTG+GLA+SR+L+ LMGG I V S EG GSTF  T+R    A+  A +   P  P+ 
Sbjct: 782  FG-GTGLGLAISRELVTLMGGRIGVVSTEGKGSTFWFTVRCEPAADPSAGVLTVPCAPEP 840

Query: 525  ---------------TELNIFMVEDIELNITVARSLLESMGHKVTVAMTGEEAIQGFNPT 569
                             L++ + ED E+N  +  ++L   GH+VT    G +A++  +  
Sbjct: 841  VPAAGDGVAGGTAQPAGLHVLVAEDNEINRDIVVTMLRRAGHRVTAVEDGLQAVRLVDEG 900

Query: 570  EYDLVFLDIQLPDMTGFDIAHYYRT--HYSSLPPLVALTANVLK-DKEEYRQKGMDAAIS 626
             +DLV +D+Q+P M G     + RT    ++  P+VALT NV+   + EY   GM A ++
Sbjct: 901  GFDLVLMDVQMPVMDGVTATRHIRTMPGEAARLPIVALTGNVMPGHRAEYLAAGMTAYLT 960

Query: 627  KPLSVAAVREVIAKMTQHHA-----GES-------VAKVKSNKEKELPDDLYQ----QLL 670
            KP+  A + +V+A +    A     G+S       +A          P +        LL
Sbjct: 961  KPIVSADLFDVLASVAASRAAGGTWGDSGLPPRAPLASASPATPSPAPSEAEAWRAVPLL 1020

Query: 671  DLEMLQSYVEIVGSQPVIDSVHLFEQSMPAYLAVLDSNMVAKDQEG----IVSEAHKIKG 726
            D     S   ++G +    +V  F +++   +A +     A  +EG     V  AH +KG
Sbjct: 1021 DDGQASSLRAVIGEEAWAQTVVAFRRTVSDSVAAI---RAAAGREGRAVPPVRIAHTLKG 1077

Query: 727  AAGSVGLKRIQKIA 740
             A ++G  R+ ++A
Sbjct: 1078 TAANIGAVRLSRLA 1091