Pairwise Alignments

Query, 785 a.a., aerobic respiration two-component sensor histidine kinase ArcB from Vibrio cholerae E7946 ATCC 55056

Subject, 861 a.a., Sensor histidine kinase RcsC from Azospirillum sp. SherDot2

 Score =  254 bits (648), Expect = 2e-71
 Identities = 196/659 (29%), Positives = 311/659 (47%), Gaps = 43/659 (6%)

Query: 150 LAERTALLRSFIDASPDLIYYRNAKGEFSGCNRAMEELTGKRESELVGLTPWDVYRKEIA 209
           L E  A  R   D + D+I    A G     + ++ ++ G   +E+VG  P ++   +  
Sbjct: 203 LGESEARYRLLADNATDMILEMKADGAVHYLSPSVRDILGHNPAEIVGSAPANLLHPDDL 262

Query: 210 QSIVETDQQVFNNNTAITYEQWLEYPDGRKSFFELRKVPFYNKDGRHLGLVGFGRDITER 269
           +S       +   +  +T+   L + DG   + E    P    DG  + +VG  RD+TER
Sbjct: 263 ESAAMAFAGLQPGSPPVTFTHRLRHRDGHYLWVESSMRPTVGSDGGFV-VVGVVRDVTER 321

Query: 270 KRHEESL-------EKASRDKTTFISTISHELRTPLNGIVGLSRMLLDTPLSGEQRKHLQ 322
           KR+EE L       E A+R K+ F++++SHE+RTPLNG++G + +LL T L+ EQR+++ 
Sbjct: 322 KRYEEELSAARAEAEAANRVKSEFLASMSHEIRTPLNGVIGFADLLLGTELTAEQRQYVS 381

Query: 323 TINVSAVTLGNIFNDIIDMDKFDRRKLELFPAALNFEEFVAEIEVLAALMAEQKGLRFDL 382
               +   L  I  DI+D  K +  KLEL   A +    + +   L +  A QKGL   L
Sbjct: 382 LQREAGRGLLAIIGDILDYSKIEAGKLELEERAFDLHRLLRDCRDLMSNAASQKGLLLQL 441

Query: 383 ERLTDLPSLVEVDSTRLRQVLWNLLSNAMKFTKEGGVVMTV-------SAECDA-QHAEI 434
                +P  V  D  R+RQ+L NL+ NA+KFT+ G V+++          E +A   A +
Sbjct: 442 SLGGTVPRYVRGDEARIRQILLNLVGNAVKFTERGSVLVSAGLLSGQGGGEGEAVPAAHV 501

Query: 435 TIEVEDTGIGIPEAEQEKIFAMYYQVKSGKDNLHAVGTGIGLAVSRQLIKLMGGDISVNS 494
            + V DTG GIP  +Q  +F  + Q        +  GTG+GL +S+QL +LMGG I V S
Sbjct: 502 RLSVSDTGPGIPATDQANLFQRFSQGDRSTTRRYG-GTGLGLIISKQLSELMGGHIGVQS 560

Query: 495 EEGFGSTFTVTIRVPLLAEAP----IEIEPQEPQTELNIFMVEDIELNITVARSLLESMG 550
             G GSTF   + +P +A AP    +E     P     I + ED+ +N  V  S+L   G
Sbjct: 561 SPGVGSTFWFELPLP-VATAPGLSTVERRDAAPTRSARILLAEDVPMNQIVTSSILCKAG 619

Query: 551 HKVTVAMTGEEAIQGFNPTEYDLVFLDIQLPDMTGFDIAHYYRT--HYSSLPPLVALTAN 608
           H V VA  G  A++     E+DLV +D+Q+P M G       R         P++ALTAN
Sbjct: 620 HTVEVAEDGILAVEAMRRGEFDLVLMDMQMPRMDGLQATAAIRQLGGRRGAVPIIALTAN 679

Query: 609 VLKDKEEY-RQKGMDAAISKPLSVAAVREVIAKMTQHHA------GESVAKVKSNKEKEL 661
            L D+ +     GM+  ++KP+    +   + +  +         G++V +         
Sbjct: 680 ALTDQLQLCLDVGMNDHVTKPIERETLLSAVGRWLEAGTDGMLPEGDAVEEATVLAGVAT 739

Query: 662 PDDLYQQLLDLEMLQSYVEIVGSQPVIDSVHLFEQSMPAYLAV-LDSNMVAKDQEGIVSE 720
             D    +L+   L +  E +G+    D +  F     A LA+  D    A   +   ++
Sbjct: 740 VSD-SAPVLNRATLDTLAETLGA----DVLPRFIAGTLAELALRTDRISEADSSKAAAAD 794

Query: 721 AHKIKGAAGSVGLKRIQKIAQKAQS------PEAPAWWENISDWVEEIKNEYQSDIALL 773
           AH +   AG+VGL  + + A+K Q       P+ P    ++ D V    +  Q+ +  L
Sbjct: 795 AHAMVSLAGNVGLLELSRTARKLQHACEQQWPDEPVLKADLRDAVNRASSALQAALPTL 853