Pairwise Alignments

Query, 238 a.a., two-component system response regulator ArcA from Vibrio cholerae E7946 ATCC 55056

Subject, 241 a.a., Transcriptional regulatory protein OmpR from Xanthobacter sp. DMC5

 Score =  157 bits (396), Expect = 2e-43
 Identities = 85/227 (37%), Positives = 127/227 (55%), Gaps = 3/227 (1%)

Query: 6   ILIVEDEQVTRNTLKSIFEAEGYAVFEASNGEEMHQVLSDYPINLVIMDINLPGKNGLLL 65
           ILIV+D+   R          G+ V  A    EM + ++   ++LVI+DI LPG +GL L
Sbjct: 11  ILIVDDDAEIRRLAGKFLREHGHKVTAAQGAREMREAMAAGTVDLVILDIMLPGVSGLDL 70

Query: 66  ARELREQADVALMFLTGRDNEVDKILGLEIGADDYITKPFNPRELTIRARNLLSRSMHAG 125
            R++R  ++V ++ LT R ++VD+I+GLE+GADDY+ KPFNPREL  R   +L R+  + 
Sbjct: 71  CRDIRRTSNVPIIMLTARGSDVDRIVGLELGADDYLAKPFNPRELLARIHAVLRRTRLSD 130

Query: 126 TTQEEKRSVEKYVFNGWELDINSRSLVSPDGDSYKLPRSEFRALLHFCENPGKIQTRADL 185
                  +     F+GW LD   R L +P+G    L   E+  LL F E+P ++ TR  L
Sbjct: 131 PAAVNGGTC--LTFSGWTLDTRRRELTNPEGAIVDLSTGEYDLLLTFLEHPQRVLTRDQL 188

Query: 186 LKKMTGRELKPHDRTVDVTIRRIRKHFESVSGTPEIIATIHGEGYRF 232
           +     R     DR +D+ + R+R+  ES  G PE++ T+ G GY F
Sbjct: 189 MDAAKNRIATGFDRAIDIQVSRLRRKLES-HGGPEMVKTVRGTGYFF 234