Pairwise Alignments

Query, 238 a.a., two-component system response regulator ArcA from Vibrio cholerae E7946 ATCC 55056

Subject, 240 a.a., Transcriptional regulatory protein OmpR from Xanthobacter sp. DMC5

 Score =  158 bits (399), Expect = 1e-43
 Identities = 89/228 (39%), Positives = 130/228 (57%), Gaps = 4/228 (1%)

Query: 4   PQILIVEDEQVTRNTLKSIFEAEGYAVFEASNGEEMHQVLSDYPINLVIMDINLPGKNGL 63
           P IL+V+D+   R  L     A+G+ V  A +G EM + L+   I+ V++D+ LP  +GL
Sbjct: 6   PHILVVDDDLEIRKLLSRYLAAQGFRVTAAGDGREMDEKLTTQRIDFVVLDLMLPDASGL 65

Query: 64  LLARELREQADVALMFLTGRDNEVDKILGLEIGADDYITKPFNPRELTIRARNLLSRSMH 123
            L R LR ++ V ++ LT    +VD+I+GLEIGADDY+ KPFNPREL  R R +L R+  
Sbjct: 66  DLCRALRARSRVPVILLTALKEDVDRIIGLEIGADDYLGKPFNPRELVARIRAVLRRT-- 123

Query: 124 AGTTQEEKRSVEKYVFNGWELDINSRSLVSPDGDSYKLPRSEFRALLHFCENPGKIQTRA 183
              T     +V  Y F G+  + + R + + DG    L  +EF  L+ F E PG+I +R 
Sbjct: 124 -SVTDPTSSAVRAYGFAGFRAEPDLRRVTAADGSEVPLTGAEFDLLMAFLERPGRILSRD 182

Query: 184 DLLKKMTGRELKPHDRTVDVTIRRIRKHFESVSGTPEIIATIHGEGYR 231
            LL    GRE  P DR+VDV + R+R+      G  +I+ T+   GY+
Sbjct: 183 QLLDITRGREAGPFDRSVDVLVSRLRRKLGD-QGAFQILKTLRNGGYQ 229