Pairwise Alignments

Query, 238 a.a., two-component system response regulator ArcA from Vibrio cholerae E7946 ATCC 55056

Subject, 242 a.a., Two-component transcriptional response regulator, OmpR family from Variovorax sp. SCN45

 Score =  170 bits (430), Expect = 3e-47
 Identities = 85/230 (36%), Positives = 137/230 (59%), Gaps = 2/230 (0%)

Query: 3   TPQILIVEDEQVTRNTLKSIFEAEGYAVFEASNGEEMHQVLSDYPINLVIMDINLPGKNG 62
           TP I++++DE      L +     G+ V +  +G  +  ++   P +LV++D+ LPG++G
Sbjct: 4   TPHIVVLDDEIDITQLLANYLHGHGFRVTQVHDGRALMALMETDPADLVLLDLGLPGEDG 63

Query: 63  LLLARELREQADVALMFLTGRDNEVDKILGLEIGADDYITKPFNPRELTIRARNLLSRSM 122
             +AR +RE+    L+ +TGR + VDK++GLE+GADDY+TKPF+ REL  R + +L R  
Sbjct: 64  FSIARRMRERWHCGLVIVTGRGDAVDKVVGLEVGADDYVTKPFDLRELVARVKAVLRRLA 123

Query: 123 HAGTTQEEKRS--VEKYVFNGWELDINSRSLVSPDGDSYKLPRSEFRALLHFCENPGKIQ 180
            A            ++  F GW+LD  +RSL++P G+   L   EF  L  F  +PG++ 
Sbjct: 124 PATPVPPASAGAFADRLRFAGWQLDTAARSLLNPSGEPVTLTGGEFDLLQAFARHPGRVL 183

Query: 181 TRADLLKKMTGRELKPHDRTVDVTIRRIRKHFESVSGTPEIIATIHGEGY 230
           +R  LL++  GRE  P DRT+DV + R+RK  E+ +  P++I ++ G GY
Sbjct: 184 SRDFLLEQTRGREAAPFDRTIDVQVGRLRKKIEADAEDPQLIKSVRGAGY 233