Pairwise Alignments

Query, 238 a.a., two-component system response regulator ArcA from Vibrio cholerae E7946 ATCC 55056

Subject, 253 a.a., DNA-binding response regulator from Sphingobium sp. HT1-2

 Score =  155 bits (392), Expect = 7e-43
 Identities = 79/236 (33%), Positives = 133/236 (56%), Gaps = 1/236 (0%)

Query: 1   MQTPQILIVEDEQVTRNTLKSIFEAEGYAVFEASNGEEMHQVLSDYPINLVIMDINLPGK 60
           M   +IL+V+D+   R  L    E  G+AV   ++G  M Q L+    ++ ++D+ +PG+
Sbjct: 16  MDGSRILVVDDDADIRILLSDFLEQHGFAVTAVADGVAMDQALAAQTFDIAVLDVMMPGE 75

Query: 61  NGLLLARELREQADVALMFLTGRDNEVDKILGLEIGADDYITKPFNPRELTIRARNLLSR 120
           +GL + R L    D+ ++ L+    ++D+I+GLE+GA+DY+ KP NPREL  R R +L R
Sbjct: 76  DGLSILRRLAASGDLPIIMLSAIGGDIDRIVGLEMGAEDYLPKPCNPRELLARVRTVLRR 135

Query: 121 SMHAGTTQEEKRSVEKYVFNGWELDINSRSLVSPDGDSYKLPRSEFRALLHFCENPGKIQ 180
           +    T++ +  + ++  F GW++D+  R L  PD     L   EFR L  F E+P ++ 
Sbjct: 136 NRRQ-TSEPQVPAGQRLRFAGWQVDMGVRLLTDPDNVVVTLTDGEFRLLRAFIEHPRRVL 194

Query: 181 TRADLLKKMTGRELKPHDRTVDVTIRRIRKHFESVSGTPEIIATIHGEGYRFCGDL 236
           +R  LL    G + + +DR +DV + R+R+  E      E++ TI  EGY F  ++
Sbjct: 195 SRDQLLDYSAGSDAESYDRAIDVQVSRLRRKLERGEMGDELVRTIRNEGYMFTAEV 250