Pairwise Alignments

Query, 238 a.a., two-component system response regulator ArcA from Vibrio cholerae E7946 ATCC 55056

Subject, 236 a.a., Two-component transcriptional response regulator, OmpR family from Sphingobium sp. HT1-2

 Score =  149 bits (377), Expect = 4e-41
 Identities = 83/233 (35%), Positives = 128/233 (54%), Gaps = 5/233 (2%)

Query: 1   MQTPQILIVEDEQVTRNTLKSIFEAEGYAVFEASNGEEMHQVLSDYPINLVIMDINLPGK 60
           M  P I++VED+   R       +  GY V  AS+G EM       P++LV++D+ LPG 
Sbjct: 1   MTAPSIILVEDDPPLRTLTARALQEHGYQVRPASSGPEMWVAFDAGPVDLVVLDVMLPGT 60

Query: 61  NGLLLARELREQADVALMFLTGRDNEVDKILGLEIGADDYITKPFNPRELTIRARNLLSR 120
           NG+ L R++R ++DV ++F++ + +E D+I+GLE+GADDY+ KPF  REL  R R +L R
Sbjct: 61  NGIDLCRQIRRKSDVPIIFISAKGSETDRIVGLELGADDYLPKPFGTRELIARIRAILRR 120

Query: 121 -SMHAGTTQEEKRSVEKYVFNGWELDINSRSLVSPDGDSYKLPRSEFRALLHFCENPGKI 179
             +  G  ++ +       F+GW ++   R L SP G    L  +EF  L  F  +P ++
Sbjct: 121 VGVERGPDEQRENEAR---FDGWIVNFPRRELRSPTGAIVDLTGAEFDLLGSFLSHPQRV 177

Query: 180 QTRADLLKKMTGRELKPHDRTVDVTIRRIRKHFESVSGTPEIIATIHGEGYRF 232
             R  L++    R     DR++DV + R+R+   S    P  I T+ G GY F
Sbjct: 178 IARERLIELSRTRMGDSSDRSIDVLVSRLRRKL-STEDRPAPITTVRGVGYMF 229