Pairwise Alignments

Query, 238 a.a., two-component system response regulator ArcA from Vibrio cholerae E7946 ATCC 55056

Subject, 246 a.a., Chemotaxis protein CheY from Pseudomonas putida KT2440

 Score =  145 bits (367), Expect = 5e-40
 Identities = 79/229 (34%), Positives = 126/229 (55%), Gaps = 2/229 (0%)

Query: 6   ILIVEDEQVTRNTLKSIFEAEGYAVFEASNGEEMHQVLSDYPINLVIMDINLPGKNGLLL 65
           ILIV+D++  R  + +  +  G      ++G +M   L    ++L+++DI +PG +GLLL
Sbjct: 7   ILIVDDDREIRELVGNYLKKNGLRTSIVADGRQMRAFLEANSVDLIVLDIMMPGDDGLLL 66

Query: 66  ARELR--EQADVALMFLTGRDNEVDKILGLEIGADDYITKPFNPRELTIRARNLLSRSMH 123
            RELR  +  +  ++ LT R++E D+I+GLE+GADDY+TKPF+ REL  R   +L R+  
Sbjct: 67  CRELRAGKHRNTPVLMLTARNDETDRIIGLEMGADDYLTKPFSARELLARINAVLRRTRM 126

Query: 124 AGTTQEEKRSVEKYVFNGWELDINSRSLVSPDGDSYKLPRSEFRALLHFCENPGKIQTRA 183
                    S     F  W LD  +R L+  +G    L  +E+R L  F ++P ++ +R 
Sbjct: 127 LPPNLTISESSRLLGFGQWRLDTTARHLLDSEGTLVALSGAEYRLLRVFLDHPQRVLSRE 186

Query: 184 DLLKKMTGRELKPHDRTVDVTIRRIRKHFESVSGTPEIIATIHGEGYRF 232
            LL    GRE    DR++D+ + R+R+     +  P  I T+  EGY F
Sbjct: 187 QLLNLTQGREADIFDRSIDLLVSRLRQRLGDDAREPSCIKTVRSEGYVF 235