Pairwise Alignments

Query, 238 a.a., two-component system response regulator ArcA from Vibrio cholerae E7946 ATCC 55056

Subject, 239 a.a., DNA-binding response regulator from Pseudomonas putida KT2440

 Score =  160 bits (405), Expect = 2e-44
 Identities = 82/225 (36%), Positives = 132/225 (58%), Gaps = 1/225 (0%)

Query: 6   ILIVEDEQVTRNTLKSIFEAEGYAVFEASNGEEMHQVLSDYPINLVIMDINLPGKNGLLL 65
           +L+V+D+   R  L       GY V  A++G++M   L+ + + LV++D+ LPG++GL L
Sbjct: 5   LLVVDDDDEIRELLCDYLTDAGYNVLAAADGQQMRDQLARHKVELVVLDLMLPGEDGLSL 64

Query: 66  ARELREQADVALMFLTGRDNEVDKILGLEIGADDYITKPFNPRELTIRARNLLSRSMHAG 125
            R+L+    +A++ L+ + + +D+I+GLE+GADDY+ KPF PREL  R + +L R    G
Sbjct: 65  CRQLQATPGLAVIMLSAKGSTLDRIIGLEVGADDYLAKPFEPRELIARIKAVLRRPQRLG 124

Query: 126 TTQEEKRSVEKYVFNGWELDINSRSLVSPDGDSYKLPRSEFRALLHFCENPGKIQTRADL 185
           T+ EE   V+  +F G+ L+   R L  PDG++  LPRS++R L    E   ++ +R  L
Sbjct: 125 TSAEEP-MVDAQLFAGFRLEHVKRLLTRPDGETLTLPRSDYRVLRELLEANNRVVSRDQL 183

Query: 186 LKKMTGRELKPHDRTVDVTIRRIRKHFESVSGTPEIIATIHGEGY 230
            +   GR+  P DR+VD+ + R+R+           I TI  EGY
Sbjct: 184 TRSAFGRDHLPDDRSVDMCVSRLRQQLRRAPAGTAQILTIRNEGY 228