Pairwise Alignments

Query, 238 a.a., two-component system response regulator ArcA from Vibrio cholerae E7946 ATCC 55056

Subject, 241 a.a., Transcriptional regulatory protein OmpR from Methylophilus sp. DMC18

 Score =  141 bits (356), Expect = 1e-38
 Identities = 86/237 (36%), Positives = 136/237 (57%), Gaps = 3/237 (1%)

Query: 2   QTPQILIVEDEQVTRNTLKSIFEAEGYAVFEASNGEEMHQVLSDYPINLVIMDINLPGKN 61
           Q  +IL+V+D+   R  L+     +G+ +   S+G+EM + L++   +L+I+D+ LPG++
Sbjct: 4   QLKKILMVDDDLRMRELLQRYLTEQGFNIKSVSDGKEMDKTLANEHFDLLILDLMLPGED 63

Query: 62  GLLLARELREQADVA-LMFLTGRDNEVDKILGLEIGADDYITKPFNPRELTIRARNLLSR 120
           GL + R LR    +  ++ LT R +EVD+I+GLE+GADDY+ KPFNPREL  R   +L R
Sbjct: 64  GLAICRRLRGANHMTPIIMLTARGDEVDRIVGLEMGADDYLPKPFNPRELLARINAVLRR 123

Query: 121 SMHAGTTQEEKRSVEKYVFNGWELDINSRSLVSPDGDSYKLPRSEFRALLHFCENPGKIQ 180
              +     E++S   + F  +  D ++RSL S +G    +   EF  L  F E+P +  
Sbjct: 124 HEISPKQAVEEKSA-AFQFGEFVFDTSTRSL-SKNGVPITITSGEFTLLKVFTEHPRQPL 181

Query: 181 TRADLLKKMTGRELKPHDRTVDVTIRRIRKHFESVSGTPEIIATIHGEGYRFCGDLE 237
           +R  L++   GREL   DR++DV + R+R+  E     P  + T+ G GY F  D E
Sbjct: 182 SRDRLMQLARGRELDVFDRSIDVQVSRLRRIIEPDPAHPRYLQTMWGFGYVFIPDGE 238