Pairwise Alignments

Query, 238 a.a., two-component system response regulator ArcA from Vibrio cholerae E7946 ATCC 55056

Subject, 241 a.a., DNA-binding response regulator from Magnetospirillum magneticum AMB-1

 Score =  173 bits (438), Expect = 3e-48
 Identities = 96/235 (40%), Positives = 138/235 (58%), Gaps = 2/235 (0%)

Query: 4   PQILIVEDEQVTRNTLKSIFEAEGYAVFEASNGEEMHQVLSDYPINLVIMDINLPGKNGL 63
           P IL+V+D++  R+ L       G  V  A +G EM +VL +  I+LV++D+ LPG++GL
Sbjct: 6   PHILVVDDDREIRDLLTKFMMRHGLRVSAAKDGIEMARVLDERRIDLVVLDLMLPGEDGL 65

Query: 64  LLARELRE-QADVALMFLTGRDNEVDKILGLEIGADDYITKPFNPRELTIRARNLLSRSM 122
            L R LRE +A + ++ LT    + D+I+GLE+GADDY+ KPFNPREL  R + +L R+ 
Sbjct: 66  SLCRRLRETRAGLPIIMLTAMGEDTDRIVGLEMGADDYVAKPFNPRELLARIKAVLRRTQ 125

Query: 123 HAGTTQEEKRSVEKYVFNGWELDINSRSLVSPDGDSYKLPRSEFRALLHFCENPGKIQTR 182
            A      KR   K  F GW LD+ +R L SPDG    L   EF  L  F E+P ++ +R
Sbjct: 126 TAEEAPA-KRGGAKACFLGWTLDLATRDLHSPDGVMVALSAGEFGLLQVFVEHPRRVLSR 184

Query: 183 ADLLKKMTGRELKPHDRTVDVTIRRIRKHFESVSGTPEIIATIHGEGYRFCGDLE 237
             LL    GR   P DR++D+ + R+RK     +  P+II T+ G GY F  ++E
Sbjct: 185 DQLLDFARGRSAVPFDRSIDIQVSRLRKRIGDDARDPQIIKTVRGGGYLFTPEVE 239