Pairwise Alignments

Query, 238 a.a., two-component system response regulator ArcA from Vibrio cholerae E7946 ATCC 55056

Subject, 278 a.a., DNA-binding response regulator from Magnetospirillum magneticum AMB-1

 Score =  136 bits (343), Expect = 4e-37
 Identities = 81/232 (34%), Positives = 117/232 (50%), Gaps = 2/232 (0%)

Query: 5   QILIVEDEQVTRNTLKSIFEAEGYAVFEASNGEEMHQVLSDYPINLVIMDINLPGKNGLL 64
           +I +V+DE   R  L+ + E  GY V   ++G    Q +   P +L I+D+ LP  +GL 
Sbjct: 46  RIYVVDDEPDIRALLRQVLEGYGYHVTPLASGALARQAIRRDPPDLCIVDLGLPDMDGLT 105

Query: 65  LARELREQADVALMFLTGRDNEVDKILGLEIGADDYITKPFNPRELTIRARNLLSRSMHA 124
           L REL E     ++ LTGR    D++LGLE+GADDYI KPF PREL  R  +++ R    
Sbjct: 106 LVRELWEDVRFGVIILTGRGGVSDRVLGLELGADDYIVKPFEPRELVARVNSVIRRRDQL 165

Query: 125 GTTQEEKRSVEKYVFNGWELDINSRSLVSPDGDSYKLPRSEFRALLHFCENPGKIQTRAD 184
             T     +  + VF  W  +    SL   DG    L  +E   L      P ++ +R  
Sbjct: 166 AATGAPVTT--RAVFADWVFESGDLSLTHADGRQETLTAAEAVLLTALLRAPKRVLSREQ 223

Query: 185 LLKKMTGRELKPHDRTVDVTIRRIRKHFESVSGTPEIIATIHGEGYRFCGDL 236
           L      ++    DR +DV I RIRK  E+   +P +I T++G GY F  D+
Sbjct: 224 LQGAEPEKDDIAFDRAIDVRISRIRKKIEADPKSPRLIKTVYGAGYLFSADV 275